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Aliases for PIR49391 Gene

Subcategory (RNA class) for PIR49391 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR49391 Gene

No Aliases found

ORGUL Members for PIR49391 Gene

Previous GeneCards Identifiers for PIR49391 Gene

  • GC01M042744

No data available for External Ids for PIR49391 Gene

Summaries for PIR49391 Gene

GeneCards Summary for PIR49391 Gene

PIR49391 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49391 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49391 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49391 Gene

Genomics for PIR49391 Gene

GeneHancer (GH) Regulatory Elements for PIR49391 Gene

Promoters and enhancers for PIR49391 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J042278 Enhancer 0.4 dbSUPER 650.7 -0.9 -850 2 ZNF362 PRDM6 GC01M042279 PIR49391 FOXJ3
GH01J042257 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +19.2 19156 2.8 HDAC1 INSM2 FEZF1 GATA3 POLR2A PRDM10 RCOR1 IKZF2 RUNX3 SMARCE1 FOXJ3 SVBP PIR49391 GC01M042279 GC01P042164
GH01J042333 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 -57.0 -56977 4.5 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 FOXJ3 GC01P042336 GC01P042337 P3H1 CCDC30 PPIH HNRNPFP1 MKRN8P CLDN19 GUCA2B
GH01J042318 Enhancer 1 Ensembl ENCODE 0.3 -41.9 -41897 2.9 ELF3 FOXA2 ARID4B RARA CREM MIXL1 HMG20B CEBPB PPARG KAT8 FOXJ3 GC01M042279 GC01M042316 PIR49391
GH01J042314 Enhancer 0.8 ENCODE 0.3 -37.1 -37059 1.5 ELF3 FOXA2 ARID4B THRB RARA SCRT2 FOS CREM MIXL1 ZNF654 FOXJ3 PPIH GC01M042279 PIR49391
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49391 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49391 Gene

Genomic Locations for PIR49391 Gene
chr1:42,278,458-42,278,489
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr1:42,744,129-42,744,160
(GRCh37/hg19)
Size:
32 bases
Orientation:
Minus strand

Genomic View for PIR49391 Gene

Genes around PIR49391 on UCSC Golden Path with GeneCards custom track

PIR49391 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49391 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR49391 Gene

ORGUL Member Location for PIR49391 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49391 Gene

Function for PIR49391 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49391 Gene

Localization for PIR49391 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49391 Gene

Pathways & Interactions for PIR49391 Gene

SuperPathways for PIR49391 Gene

No Data Available

Interacting Proteins for PIR49391 Gene

Gene Ontology (GO) - Biological Process for PIR49391 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49391 Gene

Drugs & Compounds for PIR49391 Gene

No Compound Related Data Available

Transcripts for PIR49391 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49391 Gene

No ASD Table

Relevant External Links for PIR49391 Gene

GeneLoc Exon Structure for
PIR49391

No data available for mRNA/cDNA for PIR49391 Gene

Expression for PIR49391 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49391 Gene

Orthologs for PIR49391 Gene

No data available for Orthologs and Evolution for PIR49391 Gene

Paralogs for PIR49391 Gene

No data available for Paralogs for PIR49391 Gene

Variants for PIR49391 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49391 Gene

Disorders for PIR49391 Gene

No disorders were found for PIR49391 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49391 Gene

Publications for PIR49391 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49391 Gene

Sources for PIR49391 Gene

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