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Aliases for PIR49374 Gene

Subcategory (RNA class) for PIR49374 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49374 Gene

No Aliases found

ORGUL Members for PIR49374 Gene

Previous GeneCards Identifiers for PIR49374 Gene

  • GC04P077907

No data available for External Ids for PIR49374 Gene

Summaries for PIR49374 Gene

GeneCards Summary for PIR49374 Gene

PIR49374 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49374 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49374 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49374 Gene

Genomics for PIR49374 Gene

GeneHancer (GH) Regulatory Elements for PIR49374 Gene

Promoters and enhancers for PIR49374 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I076981 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 +2.9 2931 15.3 HDGF PKNOX1 ARNT ARID4B IRF4 ETS1 TCF12 FOS RUNX3 RXRA SEPT11 SOWAHB PIR49374 LOC105377291
GH04I077000 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.4 16384 3.4 JUN PRDM1 SP7 SEPT11 CCNI PIR49374 LOC105377291
GH04I077005 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +23.0 22989 6.3 MEIS2 PKNOX1 JUN HLF SP2 CEBPB CEBPG ZNF664 POLR2A GLIS1 SEPT11 SOWAHB CCNG2 CCNI PIR49374 LOC105377291
GH04I076976 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -7.9 -7876 2.5 MITF JUN HMBOX1 SPI1 SEPT11 SOWAHB PIR48550 PIR49374
GH04I077020 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +36.2 36212 4.2 FOXA2 NFIB ARID4B RAD21 RARA YY1 ATF7 RXRA PPARG NR2F2 SEPT11 FAM47E LOC105377291 PIR49374
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49374 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49374 Gene

Genomic Locations for PIR49374 Gene
chr4:76,985,983-76,986,009
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr4:77,907,136-77,907,162
(GRCh37/hg19)

Genomic View for PIR49374 Gene

Genes around PIR49374 on UCSC Golden Path with GeneCards custom track

PIR49374 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49374 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49374 Gene

Proteins for PIR49374 Gene

Post-translational modifications for PIR49374 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49374 Gene

Domains & Families for PIR49374 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49374 Gene

Function for PIR49374 Gene

Phenotypes From GWAS Catalog for PIR49374 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49374 Gene

Localization for PIR49374 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49374 Gene

Pathways & Interactions for PIR49374 Gene

SuperPathways for PIR49374 Gene

No Data Available

Interacting Proteins for PIR49374 Gene

Gene Ontology (GO) - Biological Process for PIR49374 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49374 Gene

Drugs & Compounds for PIR49374 Gene

No Compound Related Data Available

Transcripts for PIR49374 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49374 Gene

No ASD Table

Relevant External Links for PIR49374 Gene

GeneLoc Exon Structure for
PIR49374

No data available for mRNA/cDNA for PIR49374 Gene

Expression for PIR49374 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49374 Gene

Orthologs for PIR49374 Gene

No data available for Orthologs and Evolution for PIR49374 Gene

Paralogs for PIR49374 Gene

No data available for Paralogs for PIR49374 Gene

Variants for PIR49374 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49374 Gene

Disorders for PIR49374 Gene

No disorders were found for PIR49374 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49374 Gene

Publications for PIR49374 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49374 Gene

Sources for PIR49374 Gene

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