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Aliases for PIR49359 Gene

Subcategory (RNA class) for PIR49359 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49359 Gene

No Aliases found

ORGUL Members for PIR49359 Gene

Previous GeneCards Identifiers for PIR49359 Gene

  • GC06M037186
  • GC06M037324
  • GC06M037390
  • GC06M037743

No data available for External Ids for PIR49359 Gene

Summaries for PIR49359 Gene

GeneCards Summary for PIR49359 Gene

PIR49359 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49359 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49359 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49359 Gene

Genomics for PIR49359 Gene

GeneHancer (GH) Regulatory Elements for PIR49359 Gene

Promoters and enhancers for PIR49359 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I037221 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.8 -3.9 -3860 1.8 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A ZNF2 ZBTB7B YY1 CMTR1 SRSF3 TBC1D22B PIR49359 TMEM217 GC06P042411
GH06I037238 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -24.1 -24131 8.7 FEZF1 DMAP1 IRF4 YY1 SP3 NFYC MEF2D ZNF610 GLIS1 RCOR2 TMEM217 SRSF3 COX6A1P2 FGD2 RNF8 TBC1D22B PIR49359 GC06P042411
GH06I037201 Enhancer 1.3 ENCODE dbSUPER 0.4 +15.1 15050 3.6 HDGF PKNOX1 FOXA2 ARNT YBX1 FEZF1 POLR2B ZNF207 FOS MCM3 SRSF3 TBC1D22B STK38 PIM1 CMTR1 CDKN1A RAB44 COX6A1P2 PIR49359 GC06P042411
GH06I037189 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +27.7 27650 4 PKNOX1 SMAD1 ARNT FEZF1 ZNF766 ZNF213 E2F8 REST ZNF592 MEF2D TMEM217 SRSF3 CDKN1A RAB44 CMTR1 PIM1 TBC1D22B PIR49359 GC06P042411
GH06I037179 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +36.1 36130 5.2 HDGF PKNOX1 SMAD1 ARNT POLR2B ZNF766 CBX5 ZNF592 MEF2D SMARCA4 TMEM217 PIM1 TBC1D22B PIR49359 GC06P042411
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49359 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49359 Gene

Genomic Locations for PIR49359 Gene
chr6:37,218,615-37,218,641
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr6:37,186,391-37,186,417
(GRCh37/hg19)

Genomic View for PIR49359 Gene

Genes around PIR49359 on UCSC Golden Path with GeneCards custom track

PIR49359 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49359 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49359 Gene

Proteins for PIR49359 Gene

Post-translational modifications for PIR49359 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49359 Gene

Domains & Families for PIR49359 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49359 Gene

Function for PIR49359 Gene

Phenotypes From GWAS Catalog for PIR49359 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49359 Gene

Localization for PIR49359 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49359 Gene

Pathways & Interactions for PIR49359 Gene

SuperPathways for PIR49359 Gene

No Data Available

Interacting Proteins for PIR49359 Gene

Gene Ontology (GO) - Biological Process for PIR49359 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49359 Gene

Drugs & Compounds for PIR49359 Gene

No Compound Related Data Available

Transcripts for PIR49359 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49359 Gene

No ASD Table

Relevant External Links for PIR49359 Gene

GeneLoc Exon Structure for
PIR49359

No data available for mRNA/cDNA for PIR49359 Gene

Expression for PIR49359 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49359 Gene

Orthologs for PIR49359 Gene

No data available for Orthologs and Evolution for PIR49359 Gene

Paralogs for PIR49359 Gene

No data available for Paralogs for PIR49359 Gene

Variants for PIR49359 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49359 Gene

Disorders for PIR49359 Gene

No disorders were found for PIR49359 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49359 Gene

Publications for PIR49359 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49359 Gene

Sources for PIR49359 Gene

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