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Aliases for PIR49355 Gene

Subcategory (RNA class) for PIR49355 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49355 Gene

No Aliases found

ORGUL Members for PIR49355 Gene

No data available for External Ids for PIR49355 Gene

Summaries for PIR49355 Gene

GeneCards Summary for PIR49355 Gene

PIR49355 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49355 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49355 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49355 Gene

Genomics for PIR49355 Gene

GeneHancer (GH) Regulatory Elements for PIR49355 Gene

Promoters and enhancers for PIR49355 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I029143 Enhancer 0.7 ENCODE dbSUPER 550.8 -1.3 -1335 1.6 ZNF23 L3MBTL2 ZSCAN5C ZBTB17 PIR49355 PIR42946 LOC101928215 RPS15AP33 ENSG00000261766 ENSG00000260114 SH2B1 NPIPB9 TAOK2 RRN3P2
GH16I029147 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +3.1 3126 2.6 CTCF ELF3 FOXA2 SAP130 MAX RAD21 RARA ZNF7 YY1 ZFHX2 LOC101928215 RRN3P2 ENSG00000251417 SULT1A1 PIR49355 PIR53244 ENSG00000260517 ENSG00000284685 ENSG00000284649
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49355 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49355 Gene

Genomic Locations for PIR49355 Gene
chr16:29,145,959-29,145,986
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr16:29,157,280-29,157,307
(GRCh37/hg19)

Genomic View for PIR49355 Gene

Genes around PIR49355 on UCSC Golden Path with GeneCards custom track

PIR49355 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49355 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49355 Gene

Proteins for PIR49355 Gene

Post-translational modifications for PIR49355 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49355 Gene

Domains & Families for PIR49355 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49355 Gene

Function for PIR49355 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49355 Gene

Localization for PIR49355 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49355 Gene

Pathways & Interactions for PIR49355 Gene

SuperPathways for PIR49355 Gene

No Data Available

Interacting Proteins for PIR49355 Gene

Gene Ontology (GO) - Biological Process for PIR49355 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49355 Gene

Drugs & Compounds for PIR49355 Gene

No Compound Related Data Available

Transcripts for PIR49355 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49355 Gene

No ASD Table

Relevant External Links for PIR49355 Gene

GeneLoc Exon Structure for
PIR49355

No data available for mRNA/cDNA for PIR49355 Gene

Expression for PIR49355 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49355 Gene

Orthologs for PIR49355 Gene

No data available for Orthologs and Evolution for PIR49355 Gene

Paralogs for PIR49355 Gene

No data available for Paralogs for PIR49355 Gene

Variants for PIR49355 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49355 Gene

Disorders for PIR49355 Gene

No disorders were found for PIR49355 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49355 Gene

Publications for PIR49355 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49355 Gene

Sources for PIR49355 Gene

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