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Aliases for PIR49348 Gene

Subcategory (RNA class) for PIR49348 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49348 Gene

No Aliases found

ORGUL Members for PIR49348 Gene

Previous GeneCards Identifiers for PIR49348 Gene

  • GC02M178615

No data available for External Ids for PIR49348 Gene

Summaries for PIR49348 Gene

GeneCards Summary for PIR49348 Gene

PIR49348 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49348 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49348 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49348 Gene

Genomics for PIR49348 Gene

GeneHancer (GH) Regulatory Elements for PIR49348 Gene

Promoters and enhancers for PIR49348 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J177751 Enhancer 1.1 Ensembl ENCODE 0.7 -3.3 -3328 5.4 PKNOX1 ATF1 ARNT NEUROD1 SIN3A TCF12 ZNF766 E2F8 ZFP91 ATF7 LOC100130691 PIR49348 GC02M177509 GC02M177510 GC02M177511 GC02M177483 GC02M177355 GC02M177537 GC02M177538 GC02M177469
GH02J177758 Enhancer 1 Ensembl ENCODE 0.4 -8.2 -8200 0.8 ARNT ZSCAN4 RAD21 ZNF335 ARID2 ATF7 KDM4B ZNF654 NCOA1 REST GC02M177509 GC02M177510 GC02M177511 PIR49348 GC02M177483 GC02M177355 GC02M177537 GC02M177538 GC02M177469 GC02M177532
GH02J177763 Enhancer 0.9 Ensembl 0.4 -13.2 -13191 0.6 HDAC1 ATF1 ZNF2 ZNF48 RAD21 ZNF335 ZNF143 ATF7 RUNX3 CREM GC02M177509 GC02M177510 GC02M177511 GC02M177483 PIR49348 GC02M177355 GC02M177537 GC02M177538 GC02M177469 GC02M177532
GH02J177740 Enhancer 0.6 ENCODE 0.4 +9.4 9423 1.7 MAFG ZNF395 MAFF ZNF316 HMBOX1 ZNF548 RCOR1 MAFK EMSY GC02M177464 GC02M177493 GC02M177497 HNRNPA3 FKBP7 LOC101927027 PIR49348 GC02M177509 GC02M177510 GC02M177511
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49348 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49348 Gene

Genomic Locations for PIR49348 Gene
chr2:177,750,597-177,750,623
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr2:178,615,325-178,615,351
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR49348 Gene

Genes around PIR49348 on UCSC Golden Path with GeneCards custom track

PIR49348 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49348 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49348 Gene

Function for PIR49348 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49348 Gene

Localization for PIR49348 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49348 Gene

Pathways & Interactions for PIR49348 Gene

SuperPathways for PIR49348 Gene

No Data Available

Interacting Proteins for PIR49348 Gene

Gene Ontology (GO) - Biological Process for PIR49348 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49348 Gene

Drugs & Compounds for PIR49348 Gene

No Compound Related Data Available

Transcripts for PIR49348 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49348 Gene

No ASD Table

Relevant External Links for PIR49348 Gene

GeneLoc Exon Structure for
PIR49348

No data available for mRNA/cDNA for PIR49348 Gene

Expression for PIR49348 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49348 Gene

Orthologs for PIR49348 Gene

No data available for Orthologs and Evolution for PIR49348 Gene

Paralogs for PIR49348 Gene

No data available for Paralogs for PIR49348 Gene

Variants for PIR49348 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49348 Gene

Disorders for PIR49348 Gene

No disorders were found for PIR49348 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49348 Gene

Publications for PIR49348 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49348 Gene

Sources for PIR49348 Gene

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