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Aliases for PIR49347 Gene

Subcategory (RNA class) for PIR49347 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49347 Gene

No Aliases found

ORGUL Members for PIR49347 Gene

Previous GeneCards Identifiers for PIR49347 Gene

  • GC05P017601
  • GC05P017602
  • GC05P017606
  • GC05P017610
  • GC05P017620

No data available for External Ids for PIR49347 Gene

Summaries for PIR49347 Gene

GeneCards Summary for PIR49347 Gene

PIR49347 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49347 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49347 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49347 Gene

Genomics for PIR49347 Gene

GeneHancer (GH) Regulatory Elements for PIR49347 Gene

Promoters and enhancers for PIR49347 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I035197 Enhancer 0.7 ENCODE 550.8 +0.4 396 2.1 FOXA2 RFX1 NFIA RXRA ZIC2 RAD21 NR2F2 YY1 FOXA1 GATA3 PIR49347 PRLR PIR44028
GH05I035193 Enhancer 1 Ensembl ENCODE 0.8 -2.6 -2576 3.3 DRAP1 PKNOX1 ZNF792 SAP130 ARID4B BMI1 DMAP1 ZNF644 KMT2B IRF4 PRLR PIR49347 ENSG00000250886
GH05I035228 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 +31.7 31723 2.8 HDGF PKNOX1 SIN3A YY1 ZNF143 ATF7 RXRA REST MIER3 ETV4 PRLR PIR44028 PIR49347
GH05I035202 Enhancer 0.6 ENCODE 0.8 +4.8 4758 2.2 CTCF DPF2 ZNF48 RAD21 RFX5 CTBP1 GATA3 JUND IKZF1 ZNF143 PRLR PIR49347 PIR44028
GH05I035212 Enhancer 1.1 FANTOM5 ENCODE 0.4 +15.9 15937 3.6 SMAD1 NEUROD1 SIN3A BMI1 BATF RAD21 RFX5 ATF7 ETV6 FOS PRLR PIR49347 PIR44028
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49347 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49347 Gene

Genomic Locations for PIR49347 Gene
chr5:35,198,054-35,198,083
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr5:17,599,078-17,599,107
(GRCh37/hg19)

Genomic View for PIR49347 Gene

Genes around PIR49347 on UCSC Golden Path with GeneCards custom track

PIR49347 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49347 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49347 Gene

Proteins for PIR49347 Gene

Post-translational modifications for PIR49347 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49347 Gene

Domains & Families for PIR49347 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49347 Gene

Function for PIR49347 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49347 Gene

Localization for PIR49347 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49347 Gene

Pathways & Interactions for PIR49347 Gene

SuperPathways for PIR49347 Gene

No Data Available

Interacting Proteins for PIR49347 Gene

Gene Ontology (GO) - Biological Process for PIR49347 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49347 Gene

Drugs & Compounds for PIR49347 Gene

No Compound Related Data Available

Transcripts for PIR49347 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49347 Gene

No ASD Table

Relevant External Links for PIR49347 Gene

GeneLoc Exon Structure for
PIR49347

No data available for mRNA/cDNA for PIR49347 Gene

Expression for PIR49347 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49347 Gene

Orthologs for PIR49347 Gene

No data available for Orthologs and Evolution for PIR49347 Gene

Paralogs for PIR49347 Gene

No data available for Paralogs for PIR49347 Gene

Variants for PIR49347 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49347 Gene

Disorders for PIR49347 Gene

No disorders were found for PIR49347 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49347 Gene

Publications for PIR49347 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49347 Gene

Sources for PIR49347 Gene

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