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Aliases for PIR49317 Gene

Subcategory (RNA class) for PIR49317 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49317 Gene

No Aliases found

ORGUL Members for PIR49317 Gene

Previous GeneCards Identifiers for PIR49317 Gene

  • GC06M107387

No data available for External Ids for PIR49317 Gene

Summaries for PIR49317 Gene

GeneCards Summary for PIR49317 Gene

PIR49317 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49317 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49317 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49317 Gene

Genomics for PIR49317 Gene

GeneHancer (GH) Regulatory Elements for PIR49317 Gene

Promoters and enhancers for PIR49317 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J107064 Enhancer 0.9 Ensembl ENCODE 650.7 +1.1 1058 0.7 IRF2 RB1 BATF POLR2A EED NR2F6 IKZF2 RUNX3 RXRA NFIA PIR49317 PIR52349 C6orf203 BEND3
GH06J107067 Enhancer 0.4 ENCODE 650.7 -1.8 -1807 0.2 FOXA2 ZFP64 GC06M107108 PIR38225 PIR31617 PIR52349 PIR44411 PIR37934 PIR49317 BEND3
GH06J107027 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 +37.5 37536 1.6 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 C6orf203 RPL3P7 PIR49317
GH06J107060 Enhancer 0.7 Ensembl ENCODE 0.7 +4.4 4400 1.4 SOX13 ZNF316 FOXA2 IKZF1 RUNX3 MAFK C6orf203 PIR49317
GH06J107042 Enhancer 0.6 ENCODE 0.3 +23.3 23273 0.5 PKNOX1 ZNF687 NR2F1 EBF1 DPF2 BATF IKZF1 RCOR1 SPI1 CHD2 C6orf203 PIR49317
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49317 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49317 Gene

Genomic Locations for PIR49317 Gene
chr6:107,065,898-107,065,925
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr6:107,387,102-107,387,129
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR49317 Gene

Genes around PIR49317 on UCSC Golden Path with GeneCards custom track

PIR49317 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49317 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49317 Gene

Function for PIR49317 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49317 Gene

Localization for PIR49317 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49317 Gene

Pathways & Interactions for PIR49317 Gene

SuperPathways for PIR49317 Gene

No Data Available

Interacting Proteins for PIR49317 Gene

Gene Ontology (GO) - Biological Process for PIR49317 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49317 Gene

Drugs & Compounds for PIR49317 Gene

No Compound Related Data Available

Transcripts for PIR49317 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49317 Gene

No ASD Table

Relevant External Links for PIR49317 Gene

GeneLoc Exon Structure for
PIR49317

No data available for mRNA/cDNA for PIR49317 Gene

Expression for PIR49317 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49317 Gene

Orthologs for PIR49317 Gene

No data available for Orthologs and Evolution for PIR49317 Gene

Paralogs for PIR49317 Gene

No data available for Paralogs for PIR49317 Gene

Variants for PIR49317 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49317 Gene

Disorders for PIR49317 Gene

No disorders were found for PIR49317 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49317 Gene

Publications for PIR49317 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49317 Gene

Sources for PIR49317 Gene

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