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Aliases for PIR49302 Gene

Subcategory (RNA class) for PIR49302 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49302 Gene

No Aliases found

ORGUL Members for PIR49302 Gene

Previous GeneCards Identifiers for PIR49302 Gene

  • GC06P042716

No data available for External Ids for PIR49302 Gene

Summaries for PIR49302 Gene

GeneCards Summary for PIR49302 Gene

PIR49302 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49302 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49302 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49302 Gene

Genomics for PIR49302 Gene

GeneHancer (GH) Regulatory Elements for PIR49302 Gene

Promoters and enhancers for PIR49302 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I042744 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 -1.9 -1905 4.8 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 PIR40096 PIR49302 PIR52070 TBCC BICRAL POLH XPO5 ZNF318 RRP36 FRS3
GH06I042769 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +23.0 22970 3 HDGF PKNOX1 SIN3A KLF5 ZNF207 ZNF143 ATF7 ETV6 IKZF2 RUNX3 TBCC CUL7 RPL7L1 CUL9 ABCC10 TRERF1 C6orf226 PRPH2 BICRAL GNMT
GH06I042773 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +27.2 27180 4.4 HDGF PKNOX1 SMAD1 BATF KLF5 IRF4 ZNF121 ATF7 ETV6 FOS TBCC CUL7 RPL7L1 ABCC10 CUL9 TRERF1 BICRAL C6orf226 UBR2 LOC401261
GH06I042779 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +30.8 30757 0.4 PKNOX1 NFIB ZSCAN4 NEUROD1 BMI1 ZEB1 ZNF121 ZNF366 SCRT2 ZNF416 ZNF318 GTPBP2 UBR2 POLH CUL7 BICRAL ABCC10 XPO5 RPL24P4 RPS2P29
GH06I042762 Enhancer 0.8 ENCODE dbSUPER 0.4 +14.2 14181 1.1 HDAC1 KLF1 FEZF1 ZNF843 OSR2 ZNF664 ZNF335 PRDM6 HDAC2 KDM1A RNU6-890P RPL7L1 PIR49302 BICRAL LOC401261
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49302 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49302 Gene

Genomic Locations for PIR49302 Gene
chr6:42,748,444-42,748,471
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr6:42,716,182-42,716,209
(GRCh37/hg19)

Genomic View for PIR49302 Gene

Genes around PIR49302 on UCSC Golden Path with GeneCards custom track

PIR49302 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49302 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49302 Gene

Proteins for PIR49302 Gene

Post-translational modifications for PIR49302 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49302 Gene

Domains & Families for PIR49302 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49302 Gene

Function for PIR49302 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49302 Gene

Localization for PIR49302 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49302 Gene

Pathways & Interactions for PIR49302 Gene

SuperPathways for PIR49302 Gene

No Data Available

Interacting Proteins for PIR49302 Gene

Gene Ontology (GO) - Biological Process for PIR49302 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49302 Gene

Drugs & Compounds for PIR49302 Gene

No Compound Related Data Available

Transcripts for PIR49302 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49302 Gene

No ASD Table

Relevant External Links for PIR49302 Gene

GeneLoc Exon Structure for
PIR49302

No data available for mRNA/cDNA for PIR49302 Gene

Expression for PIR49302 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49302 Gene

Orthologs for PIR49302 Gene

No data available for Orthologs and Evolution for PIR49302 Gene

Paralogs for PIR49302 Gene

No data available for Paralogs for PIR49302 Gene

Variants for PIR49302 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49302 Gene

Disorders for PIR49302 Gene

No disorders were found for PIR49302 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49302 Gene

Publications for PIR49302 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49302 Gene

Sources for PIR49302 Gene

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