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Aliases for PIR49288 Gene

Subcategory (RNA class) for PIR49288 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49288 Gene

No Aliases found

ORGUL Members for PIR49288 Gene

No data available for External Ids for PIR49288 Gene

Summaries for PIR49288 Gene

GeneCards Summary for PIR49288 Gene

PIR49288 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49288 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49288 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49288 Gene

Genomics for PIR49288 Gene

GeneHancer (GH) Regulatory Elements for PIR49288 Gene

Promoters and enhancers for PIR49288 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J000241 Enhancer 0.9 Ensembl ENCODE 650.7 +0.4 396 1.7 CTCF IRF2 FOXA2 RB1 TAL1 ZNF2 RAD21 ZNF324 TCF12 CTBP1 PIR49288 ZNF718 GC04P000247 ZNF876P
GH04J000243 Enhancer 0.4 ENCODE 650.7 +1.8 1820 0.1 NANOG POLR2A PIR49288 GC04P000247 ZNF876P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49288 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49288 Gene

Genomic Locations for PIR49288 Gene
chr4:241,777-241,806
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr4:235,566-235,595
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR49288 Gene

Genes around PIR49288 on UCSC Golden Path with GeneCards custom track

PIR49288 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49288 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49288 Gene

Function for PIR49288 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49288 Gene

Localization for PIR49288 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49288 Gene

Pathways & Interactions for PIR49288 Gene

SuperPathways for PIR49288 Gene

No Data Available

Interacting Proteins for PIR49288 Gene

Gene Ontology (GO) - Biological Process for PIR49288 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49288 Gene

Drugs & Compounds for PIR49288 Gene

No Compound Related Data Available

Transcripts for PIR49288 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49288 Gene

No ASD Table

Relevant External Links for PIR49288 Gene

GeneLoc Exon Structure for
PIR49288

No data available for mRNA/cDNA for PIR49288 Gene

Expression for PIR49288 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49288 Gene

Orthologs for PIR49288 Gene

No data available for Orthologs and Evolution for PIR49288 Gene

Paralogs for PIR49288 Gene

No data available for Paralogs for PIR49288 Gene

Variants for PIR49288 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49288 Gene

Disorders for PIR49288 Gene

No disorders were found for PIR49288 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49288 Gene

Publications for PIR49288 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49288 Gene

Sources for PIR49288 Gene

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