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Aliases for PIR49274 Gene

Subcategory (RNA class) for PIR49274 Gene

piRNA

Quality Score for this RNA gene is

6.2

Aliases for PIR49274 Gene

No Aliases found

ORGUL Members for PIR49274 Gene

Previous GeneCards Identifiers for PIR49274 Gene

  • GC02P074645

No data available for External Ids for PIR49274 Gene

Summaries for PIR49274 Gene

GeneCards Summary for PIR49274 Gene

PIR49274 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49274 Gene - the ORGUL cluster for this gene includes several descriptions:

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for PIR49274

Additional gene information for PIR49274 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49274 Gene

Genomics for PIR49274 Gene

GeneHancer (GH) Regulatory Elements for PIR49274 Gene

Promoters and enhancers for PIR49274 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I074414 Enhancer 0.7 Ensembl ENCODE 550.8 -0.5 -529 2.2 CTCF RFX1 POLR2A EBF1 RUNX3 RAD21 EZH2 PIR49274 ENSG00000234521 ENSG00000272183 INO80B ENSG00000159239 C2orf81
GH02I074417 Promoter 0.5 EPDnew 550.8 +1.7 1737 0.1 C2orf81 HMGA1P8 PIR49274 ENSG00000159239
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49274 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49274 Gene

Genomic Locations for PIR49274 Gene
chr2:74,415,904-74,416,103
(GRCh38/hg38)
Size:
200 bases
Orientation:
Plus strand
chr2:74,643,031-74,643,230
(GRCh37/hg19)

Genomic View for PIR49274 Gene

Genes around PIR49274 on UCSC Golden Path with GeneCards custom track

PIR49274 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49274 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR49274 Gene

ORGUL Member Location for PIR49274 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49274 Gene

Proteins for PIR49274 Gene

Post-translational modifications for PIR49274 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49274 Gene

Domains & Families for PIR49274 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49274 Gene

Function for PIR49274 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49274 Gene

Localization for PIR49274 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49274 Gene

Pathways & Interactions for PIR49274 Gene

SuperPathways for PIR49274 Gene

No Data Available

Interacting Proteins for PIR49274 Gene

Gene Ontology (GO) - Biological Process for PIR49274 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49274 Gene

Drugs & Compounds for PIR49274 Gene

No Compound Related Data Available

Transcripts for PIR49274 Gene

fRNAdb Secondary structures for PIR49274 Gene

  • FR238950
  • FR079650

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49274 Gene

No ASD Table

Relevant External Links for PIR49274 Gene

GeneLoc Exon Structure for
PIR49274

No data available for mRNA/cDNA for PIR49274 Gene

Expression for PIR49274 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49274 Gene

Orthologs for PIR49274 Gene

No data available for Orthologs and Evolution for PIR49274 Gene

Paralogs for PIR49274 Gene

No data available for Paralogs for PIR49274 Gene

Variants for PIR49274 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49274 Gene

Disorders for PIR49274 Gene

No disorders were found for PIR49274 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49274 Gene

Publications for PIR49274 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for PIR49274 Gene

Sources for PIR49274 Gene

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