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Aliases for PIR49222 Gene

Subcategory (RNA class) for PIR49222 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49222 Gene

No Aliases found

ORGUL Members for PIR49222 Gene

Previous GeneCards Identifiers for PIR49222 Gene

  • GC01M117593

No data available for External Ids for PIR49222 Gene

Summaries for PIR49222 Gene

GeneCards Summary for PIR49222 Gene

PIR49222 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49222 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49222 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49222 Gene

Genomics for PIR49222 Gene

GeneHancer (GH) Regulatory Elements for PIR49222 Gene

Promoters and enhancers for PIR49222 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I117050 Enhancer 0.9 Ensembl ENCODE 550.8 -0.5 -457 1.8 HDGF PKNOX1 BACH1 GATA3 POLR2A ATF7 ETV6 BCLAF1 RUNX3 ZNF687 PIR49222 CD101 CD2 CD58 TRIM45 C1orf137 LOC101929099
GH01I117048 Enhancer 0.7 Ensembl ENCODE 0.8 +2.0 2010 2.3 MITF CTBP1 POLR2A USF2 PIR49222 LOC101929099 CD101
GH01I117000 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 0.2 +48.8 48844 4.4 MEIS2 PKNOX1 SMAD1 BACH1 EBF1 CEBPG BATF IRF4 ATF7 ETV6 CD101 PTGFRN PIR49222
GH01I117007 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +43.7 43686 0.9 RXRA HLF CEBPB ZNF384 CEBPG ATF2 IRF9 ATF4 ATF3 IKZF1 PTGFRN CD101 PIR49222
GH01I117008 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.3 +41.8 41839 1.4 CTCF PTGFRN CD101 PIR49222
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49222 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49222 Gene

Genomic Locations for PIR49222 Gene
chr1:117,051,237-117,051,265
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr1:117,593,859-117,593,887
(GRCh37/hg19)

Genomic View for PIR49222 Gene

Genes around PIR49222 on UCSC Golden Path with GeneCards custom track

PIR49222 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49222 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49222 Gene

Proteins for PIR49222 Gene

Post-translational modifications for PIR49222 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49222 Gene

Domains & Families for PIR49222 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49222 Gene

Function for PIR49222 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49222 Gene

Localization for PIR49222 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49222 Gene

Pathways & Interactions for PIR49222 Gene

SuperPathways for PIR49222 Gene

No Data Available

Interacting Proteins for PIR49222 Gene

Gene Ontology (GO) - Biological Process for PIR49222 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49222 Gene

Drugs & Compounds for PIR49222 Gene

No Compound Related Data Available

Transcripts for PIR49222 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49222 Gene

No ASD Table

Relevant External Links for PIR49222 Gene

GeneLoc Exon Structure for
PIR49222

No data available for mRNA/cDNA for PIR49222 Gene

Expression for PIR49222 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49222 Gene

Orthologs for PIR49222 Gene

No data available for Orthologs and Evolution for PIR49222 Gene

Paralogs for PIR49222 Gene

No data available for Paralogs for PIR49222 Gene

Variants for PIR49222 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49222 Gene

Disorders for PIR49222 Gene

No disorders were found for PIR49222 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49222 Gene

Publications for PIR49222 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49222 Gene

Sources for PIR49222 Gene

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