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Aliases for PIR49217 Gene

Subcategory (RNA class) for PIR49217 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49217 Gene

No Aliases found

ORGUL Members for PIR49217 Gene

Previous GeneCards Identifiers for PIR49217 Gene

  • GC22P021739

No data available for External Ids for PIR49217 Gene

Summaries for PIR49217 Gene

GeneCards Summary for PIR49217 Gene

PIR49217 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49217 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49217 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49217 Gene

Genomics for PIR49217 Gene

GeneHancer (GH) Regulatory Elements for PIR49217 Gene

Promoters and enhancers for PIR49217 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I043078 Enhancer 0.8 ENCODE 0.8 -4.7 -4716 0.2 ELF3 FOXA2 ARID4B RARA THAP11 RXRA SP5 CEBPB NFIL3 KLF16 CYB5R3 GC22P043084 GC22P043085 GC22P043086 PIR49217 TTLL1 LOC100506679
GH22I043085 Enhancer 0.7 ENCODE 0.8 +2.8 2840 1.5 PKNOX1 CEBPG ZNF335 ZFHX2 ZSCAN5C ATF7 PRDM10 ETV6 IKZF2 RUNX3 TTLL1 GC22P043084 GC22P043085 GC22P043086 PIR49217
GH22I043066 Enhancer 1.1 Ensembl ENCODE 0.4 -15.9 -15867 1.4 HDAC1 PKNOX1 FOXA2 KLF17 ZNF2 ZEB1 GTF3C2 ZNF121 GLIS2 EGR1 RPS25P10 TTLL1 BIK A4GALT MCAT GC22P043084 GC22P043085 GC22P043086 PIR49217 LOC100506679
GH22I043080 Enhancer 0.5 ENCODE 0.8 -2.5 -2468 0.9 TFAP4 MAFF ZNF384 MAFK RFX5 EGR2 GC22P043084 GC22P043085 GC22P043086 PIR49217 TTLL1 LOC100506679
GH22I043060 Enhancer 0.6 ENCODE 0.3 -23.0 -22976 0.1 CTCF ZNF654 REST ZNF2 RAD21 SKIL POLR2A ZNF143 SMC3 LOC100506679 PACSIN2 ARFGAP3 PIR49217 GC22P043084 GC22P043085 GC22P043086 TTLL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49217 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49217 Gene

Genomic Locations for PIR49217 Gene
chr22:43,083,396-43,083,426
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr22:21,739,701-21,739,731
(GRCh37/hg19)

Genomic View for PIR49217 Gene

Genes around PIR49217 on UCSC Golden Path with GeneCards custom track

PIR49217 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49217 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49217 Gene

Proteins for PIR49217 Gene

Post-translational modifications for PIR49217 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49217 Gene

Domains & Families for PIR49217 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49217 Gene

Function for PIR49217 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49217 Gene

Localization for PIR49217 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49217 Gene

Pathways & Interactions for PIR49217 Gene

SuperPathways for PIR49217 Gene

No Data Available

Interacting Proteins for PIR49217 Gene

Gene Ontology (GO) - Biological Process for PIR49217 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49217 Gene

Drugs & Compounds for PIR49217 Gene

No Compound Related Data Available

Transcripts for PIR49217 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49217 Gene

No ASD Table

Relevant External Links for PIR49217 Gene

GeneLoc Exon Structure for
PIR49217

No data available for mRNA/cDNA for PIR49217 Gene

Expression for PIR49217 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49217 Gene

Orthologs for PIR49217 Gene

No data available for Orthologs and Evolution for PIR49217 Gene

Paralogs for PIR49217 Gene

No data available for Paralogs for PIR49217 Gene

Variants for PIR49217 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49217 Gene

Disorders for PIR49217 Gene

No disorders were found for PIR49217 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49217 Gene

Publications for PIR49217 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49217 Gene

Sources for PIR49217 Gene

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