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Aliases for PIR49215 Gene

Subcategory (RNA class) for PIR49215 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR49215 Gene

No Aliases found

ORGUL Members for PIR49215 Gene

Previous GeneCards Identifiers for PIR49215 Gene

  • GC11P060675

No data available for External Ids for PIR49215 Gene

Summaries for PIR49215 Gene

GeneCards Summary for PIR49215 Gene

PIR49215 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49215 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR49215

Additional gene information for PIR49215 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49215 Gene

Genomics for PIR49215 Gene

GeneHancer (GH) Regulatory Elements for PIR49215 Gene

Promoters and enhancers for PIR49215 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J060904 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 650.7 -1.2 -1207 3.3 PKNOX1 SMAD1 ZFP64 ARID4B SIN3A DMAP1 YY1 POLR2B ZNF207 ZNF143 PRPF19 GC11P060908 PIR49215 ENSG00000257052 PTGDR2 PIR47747
GH11J060909 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +6.6 6569 8.8 HDGF PKNOX1 SMAD1 SIN3A FEZF1 IRF4 YY1 POLR2B ZNF766 ZNF416 TMEM109 GC11M060911 LOC105369323 CD6 CD5 PRPF19 PTGDR2 SLC15A3 CYB561A3 VPS37C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49215 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49215 Gene

Genomic Locations for PIR49215 Gene
chr11:60,907,171-60,907,201
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr11:60,674,643-60,674,673
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR49215 Gene

Genes around PIR49215 on UCSC Golden Path with GeneCards custom track

PIR49215 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49215 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR49215 Gene

ORGUL Member Location for PIR49215 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49215 Gene

Function for PIR49215 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49215 Gene

Localization for PIR49215 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49215 Gene

Pathways & Interactions for PIR49215 Gene

SuperPathways for PIR49215 Gene

No Data Available

Interacting Proteins for PIR49215 Gene

Gene Ontology (GO) - Biological Process for PIR49215 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49215 Gene

Drugs & Compounds for PIR49215 Gene

No Compound Related Data Available

Transcripts for PIR49215 Gene

fRNAdb Secondary structures for PIR49215 Gene

  • FR164304

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49215 Gene

No ASD Table

Relevant External Links for PIR49215 Gene

GeneLoc Exon Structure for
PIR49215

No data available for mRNA/cDNA for PIR49215 Gene

Expression for PIR49215 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49215 Gene

Orthologs for PIR49215 Gene

No data available for Orthologs and Evolution for PIR49215 Gene

Paralogs for PIR49215 Gene

No data available for Paralogs for PIR49215 Gene

Variants for PIR49215 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49215 Gene

Disorders for PIR49215 Gene

No disorders were found for PIR49215 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49215 Gene

Publications for PIR49215 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49215 Gene

Sources for PIR49215 Gene

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