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Aliases for PIR49202 Gene

Subcategory (RNA class) for PIR49202 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49202 Gene

No Aliases found

ORGUL Members for PIR49202 Gene

Previous GeneCards Identifiers for PIR49202 Gene

  • GC01P154680

No data available for External Ids for PIR49202 Gene

Summaries for PIR49202 Gene

GeneCards Summary for PIR49202 Gene

PIR49202 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49202 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49202 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49202 Gene

Genomics for PIR49202 Gene

GeneHancer (GH) Regulatory Elements for PIR49202 Gene

Promoters and enhancers for PIR49202 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J154714 Enhancer 1.1 Ensembl ENCODE 0.4 +8.0 8007 3.1 HDGF HDAC1 PKNOX1 ATF1 ZNF493 ZSCAN4 ZNF2 ZNF280A TCF12 ZNF366 ENSG00000246203 MSTO1 MTX1 UBE2Q1 ENSG00000231064 TRIM46 DCST2 DCST1 GBAP1 ASH1L
GH01J154698 Enhancer 0.9 ENCODE 0.4 -9.0 -8991 0.8 ELF3 PKNOX1 FOXA2 ARID4B RAD21 ZNF48 RARA YY1 ZNF614 EGR1 CHRNB2 UBAP2L DAP3 YY1AP1 UBE2Q1 CLK2 KRTCAP2 UBE2Q1-AS1 ADAM15 DCST1-AS1
GH01J154726 Enhancer 0.9 FANTOM5 dbSUPER 0.4 +19.0 19044 0.1 MAFG BACH1 EBF1 BATF ZNF316 NFE2 EMSY MAFK SPI1 CREB3L4 PIR49202 PIR50309 KCNN3
GH01J154746 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +40.8 40776 3.5 MEIS2 CTCF PKNOX1 EBF1 ZIC2 RAD21 RFX5 ZFHX2 ZNF316 POLR2A CHRNB2 UBE2Q1 KCNN3 ADAR DCST1-AS1 ADAM15 PIR49202 PIR50309
GH01J154728 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +22.4 22433 3.1 JUN BACH1 BATF ZIC2 ZNF335 ZNF316 POLR2A ZNF366 VEZF1 NFE2 ADAR CLK2 CRTC2 UBAP2L MSTO1 PYGO2 ENSG00000271267 THBS3 ATP8B2 LOC101928120
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49202 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49202 Gene

Genomic Locations for PIR49202 Gene
chr1:154,707,632-154,707,660
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr1:154,680,108-154,680,136
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR49202 Gene

Genes around PIR49202 on UCSC Golden Path with GeneCards custom track

PIR49202 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49202 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49202 Gene

Function for PIR49202 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49202 Gene

Localization for PIR49202 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49202 Gene

Pathways & Interactions for PIR49202 Gene

SuperPathways for PIR49202 Gene

No Data Available

Interacting Proteins for PIR49202 Gene

Gene Ontology (GO) - Biological Process for PIR49202 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49202 Gene

Drugs & Compounds for PIR49202 Gene

No Compound Related Data Available

Transcripts for PIR49202 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49202 Gene

No ASD Table

Relevant External Links for PIR49202 Gene

GeneLoc Exon Structure for
PIR49202

No data available for mRNA/cDNA for PIR49202 Gene

Expression for PIR49202 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49202 Gene

Orthologs for PIR49202 Gene

No data available for Orthologs and Evolution for PIR49202 Gene

Paralogs for PIR49202 Gene

No data available for Paralogs for PIR49202 Gene

Variants for PIR49202 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49202 Gene

Disorders for PIR49202 Gene

No disorders were found for PIR49202 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49202 Gene

Publications for PIR49202 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49202 Gene

Sources for PIR49202 Gene

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