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Aliases for PIR49186 Gene

Subcategory (RNA class) for PIR49186 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49186 Gene

No Aliases found

ORGUL Members for PIR49186 Gene

Previous GeneCards Identifiers for PIR49186 Gene

  • GC12P049991
  • GC12P050000

No data available for External Ids for PIR49186 Gene

Summaries for PIR49186 Gene

GeneCards Summary for PIR49186 Gene

PIR49186 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49186 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR49186

Additional gene information for PIR49186 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49186 Gene

Genomics for PIR49186 Gene

GeneHancer (GH) Regulatory Elements for PIR49186 Gene

Promoters and enhancers for PIR49186 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J007960 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 650.7 -1.1 -1143 3.2 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 PARK7 PIR49186 ENSG00000238290 SLC45A1 LOC102724552 LOC100129776 GC01M007954
GH01J007975 Enhancer 0.9 ENCODE 0.4 +12.6 12623 0.2 HDGF FOXA2 ARID4B SIN3A ZNF2 ZNF48 NCOA2 POLR2B CBX5 ARID2 PIR46541 PIR49186 PARK7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49186 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49186 Gene

Genomic Locations for PIR49186 Gene
chr1:7,962,813-7,962,841
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr12:49,988,931-49,988,959
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR49186 Gene

Genes around PIR49186 on UCSC Golden Path with GeneCards custom track

PIR49186 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49186 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR49186 Gene

ORGUL Member Location for PIR49186 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49186 Gene

Function for PIR49186 Gene

Phenotypes From GWAS Catalog for PIR49186 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49186 Gene

Localization for PIR49186 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49186 Gene

Pathways & Interactions for PIR49186 Gene

SuperPathways for PIR49186 Gene

No Data Available

Interacting Proteins for PIR49186 Gene

Gene Ontology (GO) - Biological Process for PIR49186 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49186 Gene

Drugs & Compounds for PIR49186 Gene

No Compound Related Data Available

Transcripts for PIR49186 Gene

fRNAdb Secondary structures for PIR49186 Gene

  • FR306314
  • FR225638

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49186 Gene

No ASD Table

Relevant External Links for PIR49186 Gene

GeneLoc Exon Structure for
PIR49186

No data available for mRNA/cDNA for PIR49186 Gene

Expression for PIR49186 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49186 Gene

Orthologs for PIR49186 Gene

No data available for Orthologs and Evolution for PIR49186 Gene

Paralogs for PIR49186 Gene

No data available for Paralogs for PIR49186 Gene

Variants for PIR49186 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49186 Gene

Disorders for PIR49186 Gene

No disorders were found for PIR49186 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49186 Gene

Publications for PIR49186 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49186 Gene

Sources for PIR49186 Gene

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