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Aliases for PIR49163 Gene

Subcategory (RNA class) for PIR49163 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49163 Gene

No Aliases found

ORGUL Members for PIR49163 Gene

Previous GeneCards Identifiers for PIR49163 Gene

  • GC04P082350

No data available for External Ids for PIR49163 Gene

Summaries for PIR49163 Gene

GeneCards Summary for PIR49163 Gene

PIR49163 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49163 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49163 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49163 Gene

Genomics for PIR49163 Gene

GeneHancer (GH) Regulatory Elements for PIR49163 Gene

Promoters and enhancers for PIR49163 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J081469 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +41.9 41905 3.9 PKNOX1 FOXA2 ATF1 SIN3A YY1 GLIS2 ZNF213 ZNF143 RXRA REST RASGEF1B LOC105377306 PIR49163
GH04J081466 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +37.6 37576 0.9 CTCF ZNF654 RXRA TRIM22 REST ZNF2 RAD21 ZNF592 YY1 CC2D1A LOC105377306 PIR49163 RASGEF1B
GH04J081454 Enhancer 0.9 ENCODE dbSUPER 0.3 +24.9 24934 0.2 ATF1 JUN FOSL1 FOS NFE2 ATF7 MAFK CREM SMARCE1 MTA2 PIR49163 LOC105377306 RASGEF1B
GH04J081490 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +63.3 63306 5.5 IRF2 MEF2B RAD21 ZNF217 POLR2A NFATC1 IKZF1 FOS IKZF2 RUNX3 RASGEF1B LOC105377306 PIR49163
GH04J081465 Enhancer 0.8 ENCODE dbSUPER 0.3 +36.3 36326 1.2 PKNOX1 FOXA2 RXRA MAFG SP1 JUND MAFF ZNF316 HNF4A MAFK LOC105377306 PIR49163 RASGEF1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49163 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49163 Gene

Genomic Locations for PIR49163 Gene
chr4:81,429,768-81,429,794
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr4:82,350,922-82,350,948
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR49163 Gene

Genes around PIR49163 on UCSC Golden Path with GeneCards custom track

PIR49163 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49163 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49163 Gene

Function for PIR49163 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49163 Gene

Localization for PIR49163 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49163 Gene

Pathways & Interactions for PIR49163 Gene

SuperPathways for PIR49163 Gene

No Data Available

Interacting Proteins for PIR49163 Gene

Gene Ontology (GO) - Biological Process for PIR49163 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49163 Gene

Drugs & Compounds for PIR49163 Gene

No Compound Related Data Available

Transcripts for PIR49163 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49163 Gene

No ASD Table

Relevant External Links for PIR49163 Gene

GeneLoc Exon Structure for
PIR49163

No data available for mRNA/cDNA for PIR49163 Gene

Expression for PIR49163 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49163 Gene

Orthologs for PIR49163 Gene

No data available for Orthologs and Evolution for PIR49163 Gene

Paralogs for PIR49163 Gene

No data available for Paralogs for PIR49163 Gene

Variants for PIR49163 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49163 Gene

Disorders for PIR49163 Gene

No disorders were found for PIR49163 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49163 Gene

Publications for PIR49163 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49163 Gene

Sources for PIR49163 Gene

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