Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR49160 Gene

Subcategory (RNA class) for PIR49160 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49160 Gene

No Aliases found

ORGUL Members for PIR49160 Gene

Previous GeneCards Identifiers for PIR49160 Gene

  • GC22P024463

No data available for External Ids for PIR49160 Gene

Summaries for PIR49160 Gene

GeneCards Summary for PIR49160 Gene

PIR49160 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49160 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49160 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49160 Gene

Genomics for PIR49160 Gene

GeneHancer (GH) Regulatory Elements for PIR49160 Gene

Promoters and enhancers for PIR49160 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I053195 Enhancer 1.3 VISTA Ensembl ENCODE 0.2 -59.4 -59435 3.8 MEIS2 CTCF FEZF1 RAD21 ZNF335 ZNF664 ZSCAN5C ZNF143 SMC3 NFE2 SCFD2 FIP1L1 GC04P053179 PIR49160
GH04I053186 Enhancer 0.9 ENCODE 0.2 -69.8 -69773 0.1 ATF1 PKNOX1 INSM2 MZF1 FEZF1 ZNF2 CHAMP1 TCF12 ZNF366 ZSCAN5C GC04P053179 PIR49160 SCFD2
GH04I053188 Enhancer 0.9 ENCODE 0.2 -67.7 -67741 2 FOXA2 ARID4B RAD21 RARA ETS1 YY1 CREM MIXL1 HMG20B RXRA SCFD2 GC04P053179 PIR49160
GH04I053187 Enhancer 0.5 Ensembl 0.2 -70.2 -70245 0.4 SMARCA5 FOSL1 CC2D1A HDAC2 MTA1 MAFG KDM1A SCFD2 GC04P053179 PIR49160
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49160 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49160 Gene

Genomic Locations for PIR49160 Gene
chr4:53,256,645-53,256,673
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr22:24,461,723-24,461,751
(GRCh37/hg19)

Genomic View for PIR49160 Gene

Genes around PIR49160 on UCSC Golden Path with GeneCards custom track

PIR49160 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49160 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49160 Gene

Proteins for PIR49160 Gene

Post-translational modifications for PIR49160 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49160 Gene

Domains & Families for PIR49160 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49160 Gene

Function for PIR49160 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49160 Gene

Localization for PIR49160 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49160 Gene

Pathways & Interactions for PIR49160 Gene

SuperPathways for PIR49160 Gene

No Data Available

Interacting Proteins for PIR49160 Gene

Gene Ontology (GO) - Biological Process for PIR49160 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49160 Gene

Drugs & Compounds for PIR49160 Gene

No Compound Related Data Available

Transcripts for PIR49160 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49160 Gene

No ASD Table

Relevant External Links for PIR49160 Gene

GeneLoc Exon Structure for
PIR49160

No data available for mRNA/cDNA for PIR49160 Gene

Expression for PIR49160 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49160 Gene

Orthologs for PIR49160 Gene

No data available for Orthologs and Evolution for PIR49160 Gene

Paralogs for PIR49160 Gene

No data available for Paralogs for PIR49160 Gene

Variants for PIR49160 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49160 Gene

Disorders for PIR49160 Gene

No disorders were found for PIR49160 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49160 Gene

Publications for PIR49160 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49160 Gene

Sources for PIR49160 Gene

Content
Loading form....