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Aliases for PIR49138 Gene

Subcategory (RNA class) for PIR49138 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49138 Gene

No Aliases found

ORGUL Members for PIR49138 Gene

No data available for External Ids for PIR49138 Gene

Summaries for PIR49138 Gene

GeneCards Summary for PIR49138 Gene

PIR49138 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49138 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49138 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49138 Gene

Genomics for PIR49138 Gene

GeneHancer (GH) Regulatory Elements for PIR49138 Gene

Promoters and enhancers for PIR49138 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J001895 Enhancer 0.4 ENCODE 650.7 +0.8 817 0.5 ZNF217 GATA3 HSF1 GC16M001894 PIR49138 FAHD1 HS3ST6 MSRB1 NDUFB10 RPL3L TBL3 IGFALS HAGH
GH16J001893 Enhancer 0.3 FANTOM5 650.7 -1.9 -1865 0.2 ZFP36 GC16M001894 GC16P001892 PIR49138 HAGH HS3ST6 IGFALS
GH16J001894 Enhancer 0.2 ENCODE 650.7 -0.8 -844 0 GC16M001894 PIR49138 HS3ST6 IGFALS FAHD1 HAGH GC16P001892
GH16J001896 Enhancer 0.2 ENCODE 650.7 -0.2 -182 0.8 GC16M001894 PIR49138 FAHD1 HAGH HS3ST6 IGFALS GC16P001892
GH16J001913 Enhancer 0.9 FANTOM5 ENCODE 0.4 +18.3 18309 1 PKNOX1 KLF1 TFAP4 FOXA2 KLF17 SIN3A ZBTB7B HIC1 ZFHX2 CTBP1 FAHD1 HAGH MEIOB HS3ST6 ENSG00000260807 PIR49138
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49138 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49138 Gene

Genomic Locations for PIR49138 Gene
chr16:1,895,291-1,895,318
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr16:1,945,292-1,945,319
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR49138 Gene

Genes around PIR49138 on UCSC Golden Path with GeneCards custom track

PIR49138 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49138 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49138 Gene

Function for PIR49138 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49138 Gene

Localization for PIR49138 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49138 Gene

Pathways & Interactions for PIR49138 Gene

SuperPathways for PIR49138 Gene

No Data Available

Interacting Proteins for PIR49138 Gene

Gene Ontology (GO) - Biological Process for PIR49138 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49138 Gene

Drugs & Compounds for PIR49138 Gene

No Compound Related Data Available

Transcripts for PIR49138 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49138 Gene

No ASD Table

Relevant External Links for PIR49138 Gene

GeneLoc Exon Structure for
PIR49138

No data available for mRNA/cDNA for PIR49138 Gene

Expression for PIR49138 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49138 Gene

Orthologs for PIR49138 Gene

No data available for Orthologs and Evolution for PIR49138 Gene

Paralogs for PIR49138 Gene

No data available for Paralogs for PIR49138 Gene

Variants for PIR49138 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49138 Gene

Disorders for PIR49138 Gene

No disorders were found for PIR49138 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49138 Gene

Publications for PIR49138 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49138 Gene

Sources for PIR49138 Gene

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