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Aliases for PIR49113 Gene

Subcategory (RNA class) for PIR49113 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49113 Gene

No Aliases found

ORGUL Members for PIR49113 Gene

Previous GeneCards Identifiers for PIR49113 Gene

  • GC12P056116
  • GC12P056125
  • GC12P056134

No data available for External Ids for PIR49113 Gene

Summaries for PIR49113 Gene

GeneCards Summary for PIR49113 Gene

PIR49113 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49113 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49113 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49113 Gene

Genomics for PIR49113 Gene

GeneHancer (GH) Regulatory Elements for PIR49113 Gene

Promoters and enhancers for PIR49113 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I055715 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 550.8 -1.7 -1731 7.1 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 RDH5 BLOC1S1 PIR46127 PIR49113 BAZ2A DNAJC14 RN7SL809P TMEM198B PAN2 CDK2
GH12I055726 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 +8.5 8478 5 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 CD63 LOC105369779 BAZ2A RN7SL809P STAT2 PAN2 CDK2 RPL41 TMEM198B ZC3H10
GH12I055722 Enhancer 0.9 ENCODE dbSUPER 0.8 +4.2 4206 3.2 CTCF PKNOX1 SIN3A ZIC2 RAD21 POLR2A VEZF1 SMC3 ZNF143 CREM RDH5 LOC105369779 PIR49113 CD63 ENSG00000258311 BLOC1S1-RDH5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49113 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49113 Gene

Genomic Locations for PIR49113 Gene
chr12:55,720,403-55,720,429
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr12:56,114,187-56,114,213
(GRCh37/hg19)

Genomic View for PIR49113 Gene

Genes around PIR49113 on UCSC Golden Path with GeneCards custom track

PIR49113 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49113 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49113 Gene

Proteins for PIR49113 Gene

Post-translational modifications for PIR49113 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49113 Gene

Domains & Families for PIR49113 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49113 Gene

Function for PIR49113 Gene

Phenotypes From GWAS Catalog for PIR49113 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49113 Gene

Localization for PIR49113 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49113 Gene

Pathways & Interactions for PIR49113 Gene

SuperPathways for PIR49113 Gene

No Data Available

Interacting Proteins for PIR49113 Gene

Gene Ontology (GO) - Biological Process for PIR49113 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49113 Gene

Drugs & Compounds for PIR49113 Gene

No Compound Related Data Available

Transcripts for PIR49113 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49113 Gene

No ASD Table

Relevant External Links for PIR49113 Gene

GeneLoc Exon Structure for
PIR49113

No data available for mRNA/cDNA for PIR49113 Gene

Expression for PIR49113 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49113 Gene

Orthologs for PIR49113 Gene

No data available for Orthologs and Evolution for PIR49113 Gene

Paralogs for PIR49113 Gene

No data available for Paralogs for PIR49113 Gene

Variants for PIR49113 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49113 Gene

Disorders for PIR49113 Gene

No disorders were found for PIR49113 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49113 Gene

Publications for PIR49113 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49113 Gene

Sources for PIR49113 Gene

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