Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR49112 Gene

Subcategory (RNA class) for PIR49112 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49112 Gene

No Aliases found

ORGUL Members for PIR49112 Gene

Previous GeneCards Identifiers for PIR49112 Gene

  • GC02M027423

No data available for External Ids for PIR49112 Gene

Summaries for PIR49112 Gene

GeneCards Summary for PIR49112 Gene

PIR49112 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49112 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49112 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49112 Gene

Genomics for PIR49112 Gene

GeneHancer (GH) Regulatory Elements for PIR49112 Gene

Promoters and enhancers for PIR49112 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I054617 Enhancer 1 ENCODE dbSUPER 550.8 +0.9 861 3.4 ELF3 FOXA2 THRB RAD21 RARA ETS1 YY1 CREM THAP11 PAF1 GC02M054620 PIR49112 EML6 SPTBN1 PRORSD1P CLHC1 GC02M054617 LOC105374640
GH02I054621 Enhancer 0.4 dbSUPER 550.8 -1.7 -1684 0.8 SSRP1 PKNOX1 HMBOX1 GC02M054617 GC02M054620 PIR49112 EML6 GC02M054634 SPTBN1
GH02I054566 Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +44.3 44297 16.9 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 ZNF143 SP3 PPARGC1A EML6 SPTBN1 ENSG00000272156 PRORSD1P ENSG00000238018 LOC105374640 GC02M054620 PIR49112
GH02I054554 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 +60.5 60493 8.8 HDGF PKNOX1 FOXA2 SMAD1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SPTBN1 LOC105374640 EML6 ENSG00000203327 RPS27A RTN4 PIR49112 GC02M054620
GH02I054595 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +18.3 18255 11.3 PKNOX1 ATF1 ARNT TCF12 GATA2 ATF7 RUNX3 RXRA REST ZNF592 EML6 SPTBN1 PRORSD1P PIR49112 GC02M054620 LOC105374640
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49112 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49112 Gene

Genomic Locations for PIR49112 Gene
chr2:54,619,667-54,619,698
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr2:27,423,402-27,423,433
(GRCh37/hg19)

Genomic View for PIR49112 Gene

Genes around PIR49112 on UCSC Golden Path with GeneCards custom track

PIR49112 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49112 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49112 Gene

Proteins for PIR49112 Gene

Post-translational modifications for PIR49112 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49112 Gene

Domains & Families for PIR49112 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49112 Gene

Function for PIR49112 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49112 Gene

Localization for PIR49112 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49112 Gene

Pathways & Interactions for PIR49112 Gene

SuperPathways for PIR49112 Gene

No Data Available

Interacting Proteins for PIR49112 Gene

Gene Ontology (GO) - Biological Process for PIR49112 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49112 Gene

Drugs & Compounds for PIR49112 Gene

No Compound Related Data Available

Transcripts for PIR49112 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49112 Gene

No ASD Table

Relevant External Links for PIR49112 Gene

GeneLoc Exon Structure for
PIR49112

No data available for mRNA/cDNA for PIR49112 Gene

Expression for PIR49112 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49112 Gene

Orthologs for PIR49112 Gene

No data available for Orthologs and Evolution for PIR49112 Gene

Paralogs for PIR49112 Gene

No data available for Paralogs for PIR49112 Gene

Variants for PIR49112 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49112 Gene

Disorders for PIR49112 Gene

No disorders were found for PIR49112 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49112 Gene

Publications for PIR49112 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49112 Gene

Sources for PIR49112 Gene

Content
Loading form....