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Aliases for PIR49082 Gene

Subcategory (RNA class) for PIR49082 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49082 Gene

No Aliases found

ORGUL Members for PIR49082 Gene

Previous GeneCards Identifiers for PIR49082 Gene

  • GC12P028026

No data available for External Ids for PIR49082 Gene

Summaries for PIR49082 Gene

GeneCards Summary for PIR49082 Gene

PIR49082 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49082 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49082 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49082 Gene

Genomics for PIR49082 Gene

GeneHancer (GH) Regulatory Elements for PIR49082 Gene

Promoters and enhancers for PIR49082 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J027843 Enhancer 1 Ensembl ENCODE 0.3 -29.4 -29438 1.1 HDAC1 PKNOX1 NCOA2 ATF7 CREM ZBTB11 ELF1 ZNF592 ZNF148 SMARCA4 MANSC4 ENSG00000257042 ENSG00000274075 PIR49082
GH12J027861 Enhancer 0.6 ENCODE 0.4 -11.4 -11383 1.6 ZNF687 ATF2 EP300 RELA BCL11A NFATC1 EED IKZF1 ZNF143 ETV6 MANSC4 ENSG00000257042 PIR49082 ENSG00000274075
GH12J027871 Enhancer 0.2 ENCODE 0.7 -2.4 -2411 0.1 MANSC4 PIR49082 ENSG00000274075
GH12J027865 Enhancer 0.3 ENCODE 0.4 -7.9 -7897 0.8 CEBPB MANSC4 MRPS35 PIR49082 ENSG00000274075
GH12J027868 Enhancer 0.3 ENCODE 0.4 -6.7 -6681 0.2 MEIS2 MANSC4 PIR49082 ENSG00000274075
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49082 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49082 Gene

Genomic Locations for PIR49082 Gene
chr12:27,873,584-27,873,612
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr12:28,026,517-28,026,545
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR49082 Gene

Genes around PIR49082 on UCSC Golden Path with GeneCards custom track

PIR49082 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49082 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49082 Gene

Function for PIR49082 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49082 Gene

Localization for PIR49082 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49082 Gene

Pathways & Interactions for PIR49082 Gene

SuperPathways for PIR49082 Gene

No Data Available

Interacting Proteins for PIR49082 Gene

Gene Ontology (GO) - Biological Process for PIR49082 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49082 Gene

Drugs & Compounds for PIR49082 Gene

No Compound Related Data Available

Transcripts for PIR49082 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49082 Gene

No ASD Table

Relevant External Links for PIR49082 Gene

GeneLoc Exon Structure for
PIR49082

No data available for mRNA/cDNA for PIR49082 Gene

Expression for PIR49082 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49082 Gene

Orthologs for PIR49082 Gene

No data available for Orthologs and Evolution for PIR49082 Gene

Paralogs for PIR49082 Gene

No data available for Paralogs for PIR49082 Gene

Variants for PIR49082 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49082 Gene

Disorders for PIR49082 Gene

No disorders were found for PIR49082 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49082 Gene

Publications for PIR49082 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49082 Gene

Sources for PIR49082 Gene

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