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Aliases for PIR49044 Gene

Subcategory (RNA class) for PIR49044 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR49044 Gene

No Aliases found

ORGUL Members for PIR49044 Gene

Previous GeneCards Identifiers for PIR49044 Gene

  • GC19P041313

No data available for External Ids for PIR49044 Gene

Summaries for PIR49044 Gene

GeneCards Summary for PIR49044 Gene

PIR49044 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49044 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR49044

Additional gene information for PIR49044 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49044 Gene

Genomics for PIR49044 Gene

GeneHancer (GH) Regulatory Elements for PIR49044 Gene

Promoters and enhancers for PIR49044 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I040809 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.8 +3.7 3698 2.5 HDAC1 CLOCK ATF1 KLF17 SIN3A E2F8 EGR1 SCRT2 ATF7 EGR2 CYP2T1P EGLN2 C19orf54 COQ8B GC19P040810 PIR49044 ENSG00000268797 GC19P040724
GH19I040796 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.1 -5074 11.8 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 ZNF213 ZNF416 ZNF143 SP3 EGLN2 ENSG00000268797 ZNF780B HNRNPUL1 SNRPA ENSG00000269843 NUMBL CCDC97 ZNF546 COQ8B
GH19I040810 Enhancer 0.8 ENCODE dbSUPER 0.8 +2.3 2300 0.2 ATF1 ZNF521 ZNF148 HIC1 POLR2A MYNN SCRT2 NFE2 MLLT1 SUPT5H CYP2T1P COQ8B GC19P040810 PIR49044 ENSG00000268797 GC19P040724
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49044 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49044 Gene

Genomic Locations for PIR49044 Gene
chr19:40,807,411-40,807,441
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr19:41,313,316-41,313,346
(GRCh37/hg19)

Genomic View for PIR49044 Gene

Genes around PIR49044 on UCSC Golden Path with GeneCards custom track

PIR49044 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49044 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR49044 Gene

ORGUL Member Location for PIR49044 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49044 Gene

Proteins for PIR49044 Gene

Post-translational modifications for PIR49044 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49044 Gene

Domains & Families for PIR49044 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49044 Gene

Function for PIR49044 Gene

Phenotypes From GWAS Catalog for PIR49044 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49044 Gene

Localization for PIR49044 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49044 Gene

Pathways & Interactions for PIR49044 Gene

SuperPathways for PIR49044 Gene

No Data Available

Interacting Proteins for PIR49044 Gene

Gene Ontology (GO) - Biological Process for PIR49044 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49044 Gene

Drugs & Compounds for PIR49044 Gene

No Compound Related Data Available

Transcripts for PIR49044 Gene

fRNAdb Secondary structures for PIR49044 Gene

  • FR286823

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49044 Gene

No ASD Table

Relevant External Links for PIR49044 Gene

GeneLoc Exon Structure for
PIR49044

No data available for mRNA/cDNA for PIR49044 Gene

Expression for PIR49044 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49044 Gene

Orthologs for PIR49044 Gene

No data available for Orthologs and Evolution for PIR49044 Gene

Paralogs for PIR49044 Gene

No data available for Paralogs for PIR49044 Gene

Variants for PIR49044 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49044 Gene

Disorders for PIR49044 Gene

No disorders were found for PIR49044 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49044 Gene

Publications for PIR49044 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49044 Gene

Sources for PIR49044 Gene

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