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Aliases for PIR49037 Gene

Subcategory (RNA class) for PIR49037 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49037 Gene

No Aliases found

ORGUL Members for PIR49037 Gene

Previous GeneCards Identifiers for PIR49037 Gene

  • GC17P040452

No data available for External Ids for PIR49037 Gene

Summaries for PIR49037 Gene

GeneCards Summary for PIR49037 Gene

PIR49037 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49037 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49037 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49037 Gene

Genomics for PIR49037 Gene

GeneHancer (GH) Regulatory Elements for PIR49037 Gene

Promoters and enhancers for PIR49037 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I042301 Enhancer 0.5 dbSUPER 550.8 +1.5 1548 0.6 POLR2B POLR2A ZNF24 SUPT5H PIR49037 STAT5B ENSG00000236194 CAVIN1 HCRT KCNH4 RNU7-97P GC17M042314 STAT5A
GH17I042298 Enhancer 0.4 dbSUPER 550.8 -0.9 -925 2.4 POLR2A SUPT5H PIR49037 ENSG00000236194 RNU7-97P DHX58 STAT5A MIR5010 TUBG2
GH17I042285 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.4 -12353 6 HDGF PKNOX1 ATF1 SMAD1 MLX SIN3A ZNF207 ZNF143 ATF7 RUNX3 STAT5A FKBP10 PIR49037
GH17I042308 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.3 15331 15.9 MLX ZFP64 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 ZNF263 MEF2D GC17M042314 HMGN1P29 STAT5A ENSG00000267758 ACLY NBR2 ENSG00000267340 PLEKHH3 STAT5B ATP6V0A1
GH17I042304 Enhancer 0.7 dbSUPER 0.8 +3.8 3752 0.7 DRAP1 SAP130 MLX ARID4B RAD21 RARA TEAD3 POLR2A NR2F6 GATAD2A STAT5B ENSG00000236194 ATP6V0A1 PIR49037 GC17M042314 STAT5A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49037 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49037 Gene

Genomic Locations for PIR49037 Gene
chr17:42,300,725-42,300,752
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr17:40,452,743-40,452,770
(GRCh37/hg19)

Genomic View for PIR49037 Gene

Genes around PIR49037 on UCSC Golden Path with GeneCards custom track

PIR49037 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49037 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49037 Gene

Proteins for PIR49037 Gene

Post-translational modifications for PIR49037 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49037 Gene

Domains & Families for PIR49037 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49037 Gene

Function for PIR49037 Gene

Phenotypes From GWAS Catalog for PIR49037 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49037 Gene

Localization for PIR49037 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49037 Gene

Pathways & Interactions for PIR49037 Gene

SuperPathways for PIR49037 Gene

No Data Available

Interacting Proteins for PIR49037 Gene

Gene Ontology (GO) - Biological Process for PIR49037 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49037 Gene

Drugs & Compounds for PIR49037 Gene

No Compound Related Data Available

Transcripts for PIR49037 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49037 Gene

No ASD Table

Relevant External Links for PIR49037 Gene

GeneLoc Exon Structure for
PIR49037

No data available for mRNA/cDNA for PIR49037 Gene

Expression for PIR49037 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49037 Gene

Orthologs for PIR49037 Gene

No data available for Orthologs and Evolution for PIR49037 Gene

Paralogs for PIR49037 Gene

No data available for Paralogs for PIR49037 Gene

Variants for PIR49037 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49037 Gene

Disorders for PIR49037 Gene

No disorders were found for PIR49037 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49037 Gene

Publications for PIR49037 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49037 Gene

Sources for PIR49037 Gene

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