Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR49031 Gene

Subcategory (RNA class) for PIR49031 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49031 Gene

No Aliases found

ORGUL Members for PIR49031 Gene

Previous GeneCards Identifiers for PIR49031 Gene

  • GC05M179734

No data available for External Ids for PIR49031 Gene

Summaries for PIR49031 Gene

GeneCards Summary for PIR49031 Gene

PIR49031 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49031 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49031 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49031 Gene

Genomics for PIR49031 Gene

GeneHancer (GH) Regulatory Elements for PIR49031 Gene

Promoters and enhancers for PIR49031 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I180313 Enhancer 1 Ensembl ENCODE 0.4 -6.7 -6686 1.3 PKNOX1 ATF1 ARID4B SIN3A BRCA1 RAD21 RFX5 EGR1 CREM THAP11 MAPK9 PIR49031 GFPT2
GH05I180351 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.2 -45.7 -45740 2.4 PKNOX1 KLF17 BMI1 ZNF335 GLIS2 ZNF213 SMARCA5 SP3 ZBTB11 NFYC GFPT2 BTNL9 PIR49031
GH05I180328 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -24.6 -24631 5.8 ZNF133 SIN3A RAD21 RFX5 ETS1 ZNF766 ELK1 EGR1 ZNF143 SMARCC2 MAPK9 ENSG00000248367 GFPT2 PIR49031
GH05I180342 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -36.8 -36818 3.6 ESRRA MAX BACH1 SIN3A CEBPG ZIC2 CTBP1 GLIS2 POLR2A FOS MAPK9 ENSG00000248367 GFPT2 PIR49031
GH05I180329 Enhancer 1 ENCODE dbSUPER 0.3 -21.6 -21598 0.2 HDGF RB1 RAD21 ZNF121 ELK1 ZNF143 RCOR1 CREM SMARCA5 ZNF654 MAPK9 ENSG00000248367 GFPT2 PIR49031
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49031 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49031 Gene

Genomic Locations for PIR49031 Gene
chr5:180,307,230-180,307,258
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr5:179,734,230-179,734,258
(GRCh37/hg19)

Genomic View for PIR49031 Gene

Genes around PIR49031 on UCSC Golden Path with GeneCards custom track

PIR49031 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49031 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49031 Gene

Proteins for PIR49031 Gene

Post-translational modifications for PIR49031 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49031 Gene

Domains & Families for PIR49031 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49031 Gene

Function for PIR49031 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49031 Gene

Localization for PIR49031 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49031 Gene

Pathways & Interactions for PIR49031 Gene

SuperPathways for PIR49031 Gene

No Data Available

Interacting Proteins for PIR49031 Gene

Gene Ontology (GO) - Biological Process for PIR49031 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49031 Gene

Drugs & Compounds for PIR49031 Gene

No Compound Related Data Available

Transcripts for PIR49031 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49031 Gene

No ASD Table

Relevant External Links for PIR49031 Gene

GeneLoc Exon Structure for
PIR49031

No data available for mRNA/cDNA for PIR49031 Gene

Expression for PIR49031 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49031 Gene

Orthologs for PIR49031 Gene

No data available for Orthologs and Evolution for PIR49031 Gene

Paralogs for PIR49031 Gene

No data available for Paralogs for PIR49031 Gene

Variants for PIR49031 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49031 Gene

Disorders for PIR49031 Gene

No disorders were found for PIR49031 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49031 Gene

Publications for PIR49031 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49031 Gene

Sources for PIR49031 Gene

Content
Loading form....