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Aliases for PIR49030 Gene

Subcategory (RNA class) for PIR49030 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49030 Gene

No Aliases found

ORGUL Members for PIR49030 Gene

Previous GeneCards Identifiers for PIR49030 Gene

  • GC07P155567

No data available for External Ids for PIR49030 Gene

Summaries for PIR49030 Gene

GeneCards Summary for PIR49030 Gene

PIR49030 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49030 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49030 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49030 Gene

Genomics for PIR49030 Gene

GeneHancer (GH) Regulatory Elements for PIR49030 Gene

Promoters and enhancers for PIR49030 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J155752 Enhancer 1.9 VISTA UCNEbase Ensembl ENCODE dbSUPER 0.3 -20.1 -20134 4.2 PKNOX1 EBF1 ELF1 DPF2 BATF ATF2 IRF4 ZNF507 IKZF1 EED EN2 ENSG00000236544 RBM33 PIR49030 ENSG00000216895
GH07J155761 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -11.5 -11450 4.3 JUN MAX CEBPG POLR2A EED RBM22 RUNX3 CREM RXRA CBFB RBM33 PIR49030 ENSG00000216895
GH07J155767 Enhancer 0.9 ENCODE dbSUPER 0.4 -5.4 -5386 3.5 HDGF CTCF RB1 MAX ZNF2 RAD21 CC2D1A ARID2 SMC3 RBM22 CNPY1 EN2 ENSG00000236544 RBM33 PIR49030 ENSG00000216895
GH07J155746 Promoter/Enhancer 1.1 EPDnew dbSUPER 0.3 -28.5 -28454 0.1 SRF ZBED1 JUNB ATF2 IRF4 EED IKZF1 CREM RUNX3 RBM33 PIR49030 ENSG00000216895
GH07J155740 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -33.2 -33161 3.2 BACH1 EBF1 BATF IRF4 RELA NFATC1 EED NFE2 ETV6 IKZF2 EN2 ENSG00000236544 BLACE RBM33 PAXIP1-AS2 PIR49030 ENSG00000216895
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49030 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49030 Gene

Genomic Locations for PIR49030 Gene
chr7:155,775,021-155,775,047
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr7:155,567,715-155,567,741
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR49030 Gene

Genes around PIR49030 on UCSC Golden Path with GeneCards custom track

PIR49030 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49030 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49030 Gene

Function for PIR49030 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49030 Gene

Localization for PIR49030 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49030 Gene

Pathways & Interactions for PIR49030 Gene

SuperPathways for PIR49030 Gene

No Data Available

Interacting Proteins for PIR49030 Gene

Gene Ontology (GO) - Biological Process for PIR49030 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49030 Gene

Drugs & Compounds for PIR49030 Gene

No Compound Related Data Available

Transcripts for PIR49030 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49030 Gene

No ASD Table

Relevant External Links for PIR49030 Gene

GeneLoc Exon Structure for
PIR49030

No data available for mRNA/cDNA for PIR49030 Gene

Expression for PIR49030 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49030 Gene

Orthologs for PIR49030 Gene

No data available for Orthologs and Evolution for PIR49030 Gene

Paralogs for PIR49030 Gene

No data available for Paralogs for PIR49030 Gene

Variants for PIR49030 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49030 Gene

Disorders for PIR49030 Gene

No disorders were found for PIR49030 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49030 Gene

Publications for PIR49030 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49030 Gene

Sources for PIR49030 Gene

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