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Aliases for PIR49026 Gene

Subcategory (RNA class) for PIR49026 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49026 Gene

No Aliases found

ORGUL Members for PIR49026 Gene

Previous GeneCards Identifiers for PIR49026 Gene

  • GC06M042012

No data available for External Ids for PIR49026 Gene

Summaries for PIR49026 Gene

GeneCards Summary for PIR49026 Gene

PIR49026 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49026 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49026 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49026 Gene

Genomics for PIR49026 Gene

GeneHancer (GH) Regulatory Elements for PIR49026 Gene

Promoters and enhancers for PIR49026 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I042040 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.9 -1902 11 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF263 SP3 CCND3 TAF8 PIR49026 ENSG00000124593 RNU6-761P ENSG00000207371 MED20 BYSL FRS3 PRICKLE4
GH06I042029 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +13.6 13575 2 HDGF SMAD1 ATF1 ARNT TCF12 POLR2B ZNF766 GATA2 FOS ATF7 ENSG00000223946 ENSG00000124593 USP49 FRS3 PRICKLE4 TOMM6 MED20 ENSG00000207371 BYSL ENSG00000206977
GH06I042038 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +5.3 5290 2.1 HDAC1 HDGF ZNF766 EGR1 ZNF143 ATF7 IKZF2 RUNX3 SMARCA5 CBFB ENSG00000124593 RNU6-761P MED20 ENSG00000207371 BYSL PRICKLE4 FRS3 USP49 TOMM6 ENSG00000206977
GH06I042034 Enhancer 0.4 dbSUPER 0.4 +9.3 9286 1.4 NFE2 NFE2L2 USP49 ENSG00000124593 PRICKLE4 FRS3 TOMM6 MED20 BYSL ENSG00000207371 ENSG00000206977 ENSG00000214732
GH06I042031 Enhancer 0.4 dbSUPER 0.4 +11.8 11773 1.3 IKZF1 MLLT1 USP49 ENSG00000124593 PRICKLE4 FRS3 TOMM6 MED20 ENSG00000207371 BYSL ENSG00000206977 ENSG00000214732
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR49026 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49026 Gene

Genomic Locations for PIR49026 Gene
chr6:42,044,401-42,044,427
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr6:42,012,139-42,012,165
(GRCh37/hg19)

Genomic View for PIR49026 Gene

Genes around PIR49026 on UCSC Golden Path with GeneCards custom track

PIR49026 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49026 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49026 Gene

Proteins for PIR49026 Gene

Post-translational modifications for PIR49026 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49026 Gene

Domains & Families for PIR49026 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49026 Gene

Function for PIR49026 Gene

Phenotypes From GWAS Catalog for PIR49026 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49026 Gene

Localization for PIR49026 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49026 Gene

Pathways & Interactions for PIR49026 Gene

SuperPathways for PIR49026 Gene

No Data Available

Interacting Proteins for PIR49026 Gene

Gene Ontology (GO) - Biological Process for PIR49026 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49026 Gene

Drugs & Compounds for PIR49026 Gene

No Compound Related Data Available

Transcripts for PIR49026 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49026 Gene

No ASD Table

Relevant External Links for PIR49026 Gene

GeneLoc Exon Structure for
PIR49026

No data available for mRNA/cDNA for PIR49026 Gene

Expression for PIR49026 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49026 Gene

Orthologs for PIR49026 Gene

No data available for Orthologs and Evolution for PIR49026 Gene

Paralogs for PIR49026 Gene

No data available for Paralogs for PIR49026 Gene

Variants for PIR49026 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49026 Gene

Disorders for PIR49026 Gene

No disorders were found for PIR49026 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49026 Gene

Publications for PIR49026 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49026 Gene

Sources for PIR49026 Gene

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