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Aliases for PIR48989 Gene

Subcategory (RNA class) for PIR48989 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR48989 Gene

No Aliases found

ORGUL Members for PIR48989 Gene

Previous GeneCards Identifiers for PIR48989 Gene

  • GC15M051882
  • GC15M052332
  • GC15M053271
  • GC15M053733
  • GC15M054403
  • GC15M052504
  • GC15M053812
  • GC15M054704
  • GC15M055172
  • GC15M055632
  • GC15M056072
  • GC15M056516

No data available for External Ids for PIR48989 Gene

Summaries for PIR48989 Gene

GeneCards Summary for PIR48989 Gene

PIR48989 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48989 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48989 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48989 Gene

Genomics for PIR48989 Gene

GeneHancer (GH) Regulatory Elements for PIR48989 Gene

Promoters and enhancers for PIR48989 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I051282 Enhancer 0.7 Ensembl ENCODE 550.8 +1.4 1401 0.7 CTCF NR2F1 ELF1 RAD21 SPI1 GC15M056846 GC15M056876 GC15M057046 GC15M057060 GC15M057098 GC15M057104 GC15M057130 GC15M057134 GC15M057145 GC15M057147
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48989 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48989 Gene

Genomic Locations for PIR48989 Gene
chr15:51,284,426-51,284,452
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr15:51,576,623-51,576,649
(GRCh37/hg19)

Genomic View for PIR48989 Gene

Genes around PIR48989 on UCSC Golden Path with GeneCards custom track

PIR48989 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48989 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48989 Gene

Proteins for PIR48989 Gene

Post-translational modifications for PIR48989 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR48989 Gene

Domains & Families for PIR48989 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR48989 Gene

Function for PIR48989 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48989 Gene

Localization for PIR48989 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48989 Gene

Pathways & Interactions for PIR48989 Gene

SuperPathways for PIR48989 Gene

No Data Available

Interacting Proteins for PIR48989 Gene

Gene Ontology (GO) - Biological Process for PIR48989 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48989 Gene

Drugs & Compounds for PIR48989 Gene

No Compound Related Data Available

Transcripts for PIR48989 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48989 Gene

No ASD Table

Relevant External Links for PIR48989 Gene

GeneLoc Exon Structure for
PIR48989

No data available for mRNA/cDNA for PIR48989 Gene

Expression for PIR48989 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48989 Gene

Orthologs for PIR48989 Gene

No data available for Orthologs and Evolution for PIR48989 Gene

Paralogs for PIR48989 Gene

No data available for Paralogs for PIR48989 Gene

Variants for PIR48989 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48989 Gene

Disorders for PIR48989 Gene

No disorders were found for PIR48989 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48989 Gene

Publications for PIR48989 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48989 Gene

Sources for PIR48989 Gene

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