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Aliases for PIR48924 Gene

Subcategory (RNA class) for PIR48924 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR48924 Gene

No Aliases found

ORGUL Members for PIR48924 Gene

Previous GeneCards Identifiers for PIR48924 Gene

  • GC01P204598

No data available for External Ids for PIR48924 Gene

Summaries for PIR48924 Gene

GeneCards Summary for PIR48924 Gene

PIR48924 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48924 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR48924

Additional gene information for PIR48924 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48924 Gene

Genomics for PIR48924 Gene

GeneHancer (GH) Regulatory Elements for PIR48924 Gene

Promoters and enhancers for PIR48924 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J204647 Enhancer 1.2 Ensembl ENCODE 0.4 +18.9 18894 0.9 HDGF PKNOX1 ATF1 ARNT ARID4B SIN3A YBX1 IRF4 TCF12 ZNF766 PIR48924 ENSG00000228153 GC01P204628 LRRN2
GH01J204637 Enhancer 0.5 ENCODE 0.4 +9.2 9227 2 MXI1 USF1 BHLHE40 ZSCAN4 RCOR1 LRRN2 ENSG00000240710 MDM4 PIR48924 GC01P204628 ENSG00000228153
GH01J204651 Enhancer 0.6 ENCODE 0.3 +23.0 23041 0 OSR2 NFIC NFIB SIN3A CTBP2 ZIC2 EZH2 SP7 ENSG00000228153 GC01P204628 PIR48924 LRRN2
GH01J204652 Enhancer 0.5 ENCODE 0.3 +23.1 23141 0 OSR2 NFIC NFIB SIN3A CTBP2 ZIC2 SP7 LRRN2 ENSG00000228153 GC01P204628 PIR48924
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48924 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48924 Gene

Genomic Locations for PIR48924 Gene
chr1:204,628,957-204,628,988
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr1:204,598,085-204,598,116
(GRCh37/hg19)
Size:
32 bases
Orientation:
Plus strand

Genomic View for PIR48924 Gene

Genes around PIR48924 on UCSC Golden Path with GeneCards custom track

PIR48924 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48924 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48924 Gene

ORGUL Member Location for PIR48924 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48924 Gene

Function for PIR48924 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48924 Gene

Localization for PIR48924 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48924 Gene

Pathways & Interactions for PIR48924 Gene

SuperPathways for PIR48924 Gene

No Data Available

Interacting Proteins for PIR48924 Gene

Gene Ontology (GO) - Biological Process for PIR48924 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48924 Gene

Drugs & Compounds for PIR48924 Gene

No Compound Related Data Available

Transcripts for PIR48924 Gene

fRNAdb Secondary structures for PIR48924 Gene

  • FR377206

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48924 Gene

No ASD Table

Relevant External Links for PIR48924 Gene

GeneLoc Exon Structure for
PIR48924

No data available for mRNA/cDNA for PIR48924 Gene

Expression for PIR48924 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48924 Gene

Orthologs for PIR48924 Gene

No data available for Orthologs and Evolution for PIR48924 Gene

Paralogs for PIR48924 Gene

No data available for Paralogs for PIR48924 Gene

Variants for PIR48924 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48924 Gene

Disorders for PIR48924 Gene

No disorders were found for PIR48924 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48924 Gene

Publications for PIR48924 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48924 Gene

Sources for PIR48924 Gene

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