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Aliases for PIR48895 Gene

Subcategory (RNA class) for PIR48895 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR48895 Gene

No Aliases found

ORGUL Members for PIR48895 Gene

Previous GeneCards Identifiers for PIR48895 Gene

  • GC22M024401
  • GC22M024562
  • GC22M024843
  • GC22M025021
  • GC22M025277
  • GC22M024102
  • GC22M024595
  • GC22M025353
  • GC22M025562
  • GC22M025743
  • GC22M025931
  • GC22M026110

No data available for External Ids for PIR48895 Gene

Summaries for PIR48895 Gene

GeneCards Summary for PIR48895 Gene

PIR48895 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48895 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR48895

Additional gene information for PIR48895 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48895 Gene

Genomics for PIR48895 Gene

GeneHancer (GH) Regulatory Elements for PIR48895 Gene

Promoters and enhancers for PIR48895 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I023904 Enhancer 0.6 ENCODE dbSUPER 550.8 +1.3 1342 1 POLR2A ZIC2 GC22M026297 GC22M026299 GC22M026300 GC22M026303 GC22M026309 GC22M026310 GC22M026327 GC22M026328 GC22M026329 GC22M026330
GH22I023905 Enhancer 0.5 ENCODE dbSUPER 550.8 +0.8 754 0.2 POLR2A ENSG00000273295 GC22M026297 GC22M026299 GC22M026309 GC22M026310 GC22M026327 GC22M026329 GC22M026330 GC22M026331 GC22M026332
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48895 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48895 Gene

Genomic Locations for PIR48895 Gene
chr22:23,906,311-23,906,342
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr22:24,248,498-24,248,529
(GRCh37/hg19)

Genomic View for PIR48895 Gene

Genes around PIR48895 on UCSC Golden Path with GeneCards custom track

PIR48895 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48895 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48895 Gene

ORGUL Member Location for PIR48895 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48895 Gene

Proteins for PIR48895 Gene

Post-translational modifications for PIR48895 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR48895 Gene

Domains & Families for PIR48895 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR48895 Gene

Function for PIR48895 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48895 Gene

Localization for PIR48895 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48895 Gene

Pathways & Interactions for PIR48895 Gene

SuperPathways for PIR48895 Gene

No Data Available

Interacting Proteins for PIR48895 Gene

Gene Ontology (GO) - Biological Process for PIR48895 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48895 Gene

Drugs & Compounds for PIR48895 Gene

No Compound Related Data Available

Transcripts for PIR48895 Gene

fRNAdb Secondary structures for PIR48895 Gene

  • FR142370

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48895 Gene

No ASD Table

Relevant External Links for PIR48895 Gene

GeneLoc Exon Structure for
PIR48895

No data available for mRNA/cDNA for PIR48895 Gene

Expression for PIR48895 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48895 Gene

Orthologs for PIR48895 Gene

No data available for Orthologs and Evolution for PIR48895 Gene

Paralogs for PIR48895 Gene

No data available for Paralogs for PIR48895 Gene

Variants for PIR48895 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48895 Gene

Disorders for PIR48895 Gene

No disorders were found for PIR48895 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48895 Gene

Publications for PIR48895 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48895 Gene

Sources for PIR48895 Gene

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