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Aliases for PIR48891 Gene

Subcategory (RNA class) for PIR48891 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48891 Gene

No Aliases found

ORGUL Members for PIR48891 Gene

Previous GeneCards Identifiers for PIR48891 Gene

  • GC0XM106174

No data available for External Ids for PIR48891 Gene

Summaries for PIR48891 Gene

GeneCards Summary for PIR48891 Gene

PIR48891 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48891 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48891 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48891 Gene

Genomics for PIR48891 Gene

GeneHancer (GH) Regulatory Elements for PIR48891 Gene

Promoters and enhancers for PIR48891 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ106927 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 650.7 -1.8 -1811 7.7 ELF3 FOXA2 RAD21 YY1 EGR1 FOS CREM EGR2 RXRA CEBPB PIR48891 CLDN2 RIPPLY1 MYCLP1 TBC1D8B GC0XM106980 MORC4
GH0XJ106917 Promoter/Enhancer 1.1 EPDnew ENCODE 0.4 +10.7 10697 0.9 REST EP300 SP1 JUND POLR2A FOSL2 MAFK TCF7L2 CLDN2 PIR48891 RIPPLY1 MORC4
GH0XJ106905 Enhancer 0.8 ENCODE dbSUPER 0.3 +22.8 22799 2.4 SCRT1 RXRA MAX ZNF398 REST RFX5 HNF4A SPI1 RIPPLY1 CLDN2 PIR48891 MORC4
GH0XJ106912 Enhancer 0.5 dbSUPER 0.4 +15.6 15568 1.6 SP1 JUND ATF3 RXRA MAX HNF4A CLDN2 RIPPLY1 PIR48891 MORC4
GH0XJ106920 Enhancer 0.4 ENCODE 0.4 +8.9 8909 0.2 HNF4A ZIC2 PIR48891 CLDN2 RIPPLY1 MORC4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48891 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48891 Gene

Genomic Locations for PIR48891 Gene
chrX:106,929,027-106,929,055
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chrX:106,172,257-106,172,285
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR48891 Gene

Genes around PIR48891 on UCSC Golden Path with GeneCards custom track

PIR48891 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48891 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48891 Gene

Function for PIR48891 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48891 Gene

Localization for PIR48891 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48891 Gene

Pathways & Interactions for PIR48891 Gene

SuperPathways for PIR48891 Gene

No Data Available

Interacting Proteins for PIR48891 Gene

Gene Ontology (GO) - Biological Process for PIR48891 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48891 Gene

Drugs & Compounds for PIR48891 Gene

No Compound Related Data Available

Transcripts for PIR48891 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48891 Gene

No ASD Table

Relevant External Links for PIR48891 Gene

GeneLoc Exon Structure for
PIR48891

No data available for mRNA/cDNA for PIR48891 Gene

Expression for PIR48891 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48891 Gene

Orthologs for PIR48891 Gene

No data available for Orthologs and Evolution for PIR48891 Gene

Paralogs for PIR48891 Gene

No data available for Paralogs for PIR48891 Gene

Variants for PIR48891 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48891 Gene

Disorders for PIR48891 Gene

No disorders were found for PIR48891 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48891 Gene

Publications for PIR48891 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48891 Gene

Sources for PIR48891 Gene

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