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Aliases for PIR48824 Gene

Subcategory (RNA class) for PIR48824 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48824 Gene

No Aliases found

ORGUL Members for PIR48824 Gene

Previous GeneCards Identifiers for PIR48824 Gene

  • GC15P065826

No data available for External Ids for PIR48824 Gene

Summaries for PIR48824 Gene

GeneCards Summary for PIR48824 Gene

PIR48824 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48824 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48824 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48824 Gene

Genomics for PIR48824 Gene

GeneHancer (GH) Regulatory Elements for PIR48824 Gene

Promoters and enhancers for PIR48824 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J065529 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 0.7 -2.1 -2145 4.9 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 HACD3 INTS14 SLC24A1 RNU5B-1 ENSG00000259346 RNU5A-1 HNRNPA1P44 ENSG00000239465 RPL35AP32 PARP16
GH15J065550 Enhancer 0.8 ENCODE 0.4 +16.6 16576 1.5 HDAC1 ARNT CHAMP1 TCF12 GATA2 SCRT2 NCOA1 ZEB2 NFIC MTA1 INTS14 GC15M065555 RNU6-19P PIR48824 HACD3
GH15J065549 Enhancer 0.4 FANTOM5 0.4 +15.2 15200 0.4 ZMYM3 ZBTB33 PARP16 GC15M065555 RNU6-19P PIR48824 HACD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48824 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48824 Gene

Genomic Locations for PIR48824 Gene
chr15:65,534,414-65,534,440
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr15:65,826,752-65,826,778
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR48824 Gene

Genes around PIR48824 on UCSC Golden Path with GeneCards custom track

PIR48824 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48824 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48824 Gene

Function for PIR48824 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48824 Gene

Localization for PIR48824 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48824 Gene

Pathways & Interactions for PIR48824 Gene

SuperPathways for PIR48824 Gene

No Data Available

Interacting Proteins for PIR48824 Gene

Gene Ontology (GO) - Biological Process for PIR48824 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48824 Gene

Drugs & Compounds for PIR48824 Gene

No Compound Related Data Available

Transcripts for PIR48824 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48824 Gene

No ASD Table

Relevant External Links for PIR48824 Gene

GeneLoc Exon Structure for
PIR48824

No data available for mRNA/cDNA for PIR48824 Gene

Expression for PIR48824 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48824 Gene

Orthologs for PIR48824 Gene

No data available for Orthologs and Evolution for PIR48824 Gene

Paralogs for PIR48824 Gene

No data available for Paralogs for PIR48824 Gene

Variants for PIR48824 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48824 Gene

Disorders for PIR48824 Gene

No disorders were found for PIR48824 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48824 Gene

Publications for PIR48824 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48824 Gene

Sources for PIR48824 Gene

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