Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR48796 Gene

Subcategory (RNA class) for PIR48796 Gene

piRNA

Quality Score for this RNA gene is

19.2

Aliases for PIR48796 Gene

No Aliases found

ORGUL Members for PIR48796 Gene

Previous GeneCards Identifiers for PIR48796 Gene

  • GC04P010276
  • GC04P010519
  • GC04P010708
  • GC04P010872
  • GC04P011149

No data available for External Ids for PIR48796 Gene

Summaries for PIR48796 Gene

GeneCards Summary for PIR48796 Gene

PIR48796 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48796 Gene - the ORGUL cluster for this gene includes several descriptions:

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for PIR48796

Additional gene information for PIR48796 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48796 Gene

Genomics for PIR48796 Gene

Genomic Locations for PIR48796 Gene

Genomic Locations for PIR48796 Gene
chr4:20,249,491-20,249,597
(GRCh38/hg38)
Size:
107 bases
Orientation:
Plus strand
chr4:10,125,575-10,125,604
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR48796 Gene

Genes around PIR48796 on UCSC Golden Path with GeneCards custom track

PIR48796 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48796 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48796 Gene

ORGUL Member Location for PIR48796 gene

No data available for GeneHancer (GH) Regulatory Elements , Cytogenetic band and RefSeq DNA sequence for PIR48796 Gene

Function for PIR48796 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48796 Gene

Localization for PIR48796 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48796 Gene

Pathways & Interactions for PIR48796 Gene

SuperPathways for PIR48796 Gene

No Data Available

Interacting Proteins for PIR48796 Gene

Gene Ontology (GO) - Biological Process for PIR48796 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48796 Gene

Drugs & Compounds for PIR48796 Gene

No Compound Related Data Available

Transcripts for PIR48796 Gene

fRNAdb Secondary structures for PIR48796 Gene

  • FR223883
  • FR112781

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48796 Gene

No ASD Table

Relevant External Links for PIR48796 Gene

GeneLoc Exon Structure for
PIR48796

No data available for mRNA/cDNA for PIR48796 Gene

Expression for PIR48796 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48796 Gene

Orthologs for PIR48796 Gene

No data available for Orthologs and Evolution for PIR48796 Gene

Paralogs for PIR48796 Gene

No data available for Paralogs for PIR48796 Gene

Variants for PIR48796 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48796 Gene

Disorders for PIR48796 Gene

No disorders were found for PIR48796 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48796 Gene

Publications for PIR48796 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for PIR48796 Gene

Sources for PIR48796 Gene

Content
Loading form....