Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR48774 Gene

Subcategory (RNA class) for PIR48774 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48774 Gene

No Aliases found

ORGUL Members for PIR48774 Gene

Previous GeneCards Identifiers for PIR48774 Gene

  • GC17P020697
  • GC17P021104
  • GC17P021428
  • GC17P021788
  • GC17P022773
  • GC17P042807
  • GC17P042915
  • GC17P042972
  • GC17P043037
  • GC17P043105
  • GC17P043192
  • GC17P043267
  • GC17P043361

No data available for External Ids for PIR48774 Gene

Summaries for PIR48774 Gene

GeneCards Summary for PIR48774 Gene

PIR48774 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48774 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48774 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48774 Gene

Genomics for PIR48774 Gene

GeneHancer (GH) Regulatory Elements for PIR48774 Gene

Promoters and enhancers for PIR48774 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J042750 Enhancer 1.1 Ensembl ENCODE 650.7 +0.7 654 0.7 HDAC1 ATF1 PKNOX1 ARNT ZBTB40 ZNF335 TCF12 GATA2 ETV6 CREM ENSG00000273650 GC17P042834 GC17P042835 GC17P043339 GC17P043340 GC17P043362 GC17P043363 GC17P043434 GC17P043436 GC17P043508
GH17J042749 Enhancer 0.5 ENCODE 650.7 -1.2 -1210 0.2 TGIF2 XRCC5 RAD51 ARID4B PRDM10 GC17P043339 GC17P043340 GC17P043353 GC17P043354 GC17P043376 GC17P043378 GC17P043405 GC17P043406 GC17P043507 GC17P043508
GH17J042748 Enhancer 0.3 ENCODE 650.7 -1.7 -1720 0.1 SP1 GC17P043339 GC17P043340 GC17P043353 GC17P043354 GC17P043376 GC17P043378 GC17P043405 GC17P043406 GC17P043507 GC17P043508
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48774 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48774 Gene

Genomic Locations for PIR48774 Gene
chr17:42,750,488-42,750,519
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr17:20,451,253-20,451,284
(GRCh37/hg19)
Size:
32 bases
Orientation:
Plus strand

Genomic View for PIR48774 Gene

Genes around PIR48774 on UCSC Golden Path with GeneCards custom track

PIR48774 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48774 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48774 Gene

Function for PIR48774 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48774 Gene

Localization for PIR48774 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48774 Gene

Pathways & Interactions for PIR48774 Gene

SuperPathways for PIR48774 Gene

No Data Available

Interacting Proteins for PIR48774 Gene

Gene Ontology (GO) - Biological Process for PIR48774 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48774 Gene

Drugs & Compounds for PIR48774 Gene

No Compound Related Data Available

Transcripts for PIR48774 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48774 Gene

No ASD Table

Relevant External Links for PIR48774 Gene

GeneLoc Exon Structure for
PIR48774

No data available for mRNA/cDNA for PIR48774 Gene

Expression for PIR48774 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48774 Gene

Orthologs for PIR48774 Gene

No data available for Orthologs and Evolution for PIR48774 Gene

Paralogs for PIR48774 Gene

No data available for Paralogs for PIR48774 Gene

Variants for PIR48774 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48774 Gene

Disorders for PIR48774 Gene

No disorders were found for PIR48774 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48774 Gene

Publications for PIR48774 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48774 Gene

Sources for PIR48774 Gene

Content
Loading form....