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Aliases for PIR48760 Gene

Subcategory (RNA class) for PIR48760 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR48760 Gene

No Aliases found

ORGUL Members for PIR48760 Gene

Previous GeneCards Identifiers for PIR48760 Gene

  • GC08M028204

No data available for External Ids for PIR48760 Gene

Summaries for PIR48760 Gene

GeneCards Summary for PIR48760 Gene

PIR48760 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48760 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48760 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48760 Gene

Genomics for PIR48760 Gene

GeneHancer (GH) Regulatory Elements for PIR48760 Gene

Promoters and enhancers for PIR48760 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I028346 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.8 -2.7 -2727 7.9 HDGF PKNOX1 ZBTB7B ZNF121 HSF1 ZNF143 FOS IKZF2 ZNF362 SMARCC1 FZD3 FBXO16 EXTL3 NUGGC PNOC PIR39512 PIR48760 ZNF395
GH08I028336 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +6.6 6634 9.3 HDGF PKNOX1 FOXA2 SMAD1 MLX ZFP64 ARID4B IRF4 ZNF143 ATF7 PNOC ENSG00000253690 ELP3 PIR48760
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48760 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48760 Gene

Genomic Locations for PIR48760 Gene
chr8:28,347,381-28,347,409
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr8:28,204,898-28,204,926
(GRCh37/hg19)

Genomic View for PIR48760 Gene

Genes around PIR48760 on UCSC Golden Path with GeneCards custom track

PIR48760 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48760 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48760 Gene

Proteins for PIR48760 Gene

Post-translational modifications for PIR48760 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR48760 Gene

Domains & Families for PIR48760 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR48760 Gene

Function for PIR48760 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48760 Gene

Localization for PIR48760 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48760 Gene

Pathways & Interactions for PIR48760 Gene

SuperPathways for PIR48760 Gene

No Data Available

Interacting Proteins for PIR48760 Gene

Gene Ontology (GO) - Biological Process for PIR48760 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48760 Gene

Drugs & Compounds for PIR48760 Gene

No Compound Related Data Available

Transcripts for PIR48760 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48760 Gene

No ASD Table

Relevant External Links for PIR48760 Gene

GeneLoc Exon Structure for
PIR48760

No data available for mRNA/cDNA for PIR48760 Gene

Expression for PIR48760 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48760 Gene

Orthologs for PIR48760 Gene

No data available for Orthologs and Evolution for PIR48760 Gene

Paralogs for PIR48760 Gene

No data available for Paralogs for PIR48760 Gene

Variants for PIR48760 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48760 Gene

Disorders for PIR48760 Gene

No disorders were found for PIR48760 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48760 Gene

Publications for PIR48760 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48760 Gene

Sources for PIR48760 Gene

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