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Aliases for PIR48714 Gene

Subcategory (RNA class) for PIR48714 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR48714 Gene

No Aliases found

ORGUL Members for PIR48714 Gene

Previous GeneCards Identifiers for PIR48714 Gene

  • GC12P007795

No data available for External Ids for PIR48714 Gene

Summaries for PIR48714 Gene

GeneCards Summary for PIR48714 Gene

PIR48714 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48714 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48714 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48714 Gene

Genomics for PIR48714 Gene

GeneHancer (GH) Regulatory Elements for PIR48714 Gene

Promoters and enhancers for PIR48714 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I007642 Enhancer 0.8 ENCODE 550.8 +0.4 389 0.2 BCOR HDGF CTCF NFRKB MAX CHD4 SIN3A ZMYM3 RAD21 CC2D1A PIR48714 DPPA3 GC12M007647
GH12I007637 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.8 -3.0 -2968 3.7 CTCF MXI1 PKNOX1 RB1 SIN3A ZNF2 RAD21 ZNF335 CC2D1A POLR2A ENSG00000219410 ZNF384 SCARNA12 GDF3 LAG3 DPPA3 SLC2A14 NANOG PEX5 PIR48714
GH12I007645 Enhancer 0.7 Ensembl ENCODE 0.8 +3.4 3443 0.6 MITF CTCF USF1 TRIM22 ZNF143 EBF1 DPPA3 GDF3 PEX5 PIR48714 GC12M007647
GH12I007646 Enhancer 0.5 ENCODE 0.8 +3.0 2969 0.2 MITF CTCF ZNF654 TRIM22 ZNF143 RAD21 PRDM1 DPPA3 GDF3 PIR48714 GC12M007647
GH12I007628 Enhancer 0.4 FANTOM5 0.4 -14.1 -14135 0.1 SIN3A SLC2A14 LRRC23 ENSG00000284522 PIR48714
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48714 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48714 Gene

Genomic Locations for PIR48714 Gene
chr12:7,642,611-7,642,639
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr12:7,795,207-7,795,235
(GRCh37/hg19)

Genomic View for PIR48714 Gene

Genes around PIR48714 on UCSC Golden Path with GeneCards custom track

PIR48714 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48714 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48714 Gene

Proteins for PIR48714 Gene

Post-translational modifications for PIR48714 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR48714 Gene

Domains & Families for PIR48714 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR48714 Gene

Function for PIR48714 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48714 Gene

Localization for PIR48714 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48714 Gene

Pathways & Interactions for PIR48714 Gene

SuperPathways for PIR48714 Gene

No Data Available

Interacting Proteins for PIR48714 Gene

Gene Ontology (GO) - Biological Process for PIR48714 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48714 Gene

Drugs & Compounds for PIR48714 Gene

No Compound Related Data Available

Transcripts for PIR48714 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48714 Gene

No ASD Table

Relevant External Links for PIR48714 Gene

GeneLoc Exon Structure for
PIR48714

No data available for mRNA/cDNA for PIR48714 Gene

Expression for PIR48714 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48714 Gene

Orthologs for PIR48714 Gene

No data available for Orthologs and Evolution for PIR48714 Gene

Paralogs for PIR48714 Gene

No data available for Paralogs for PIR48714 Gene

Variants for PIR48714 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48714 Gene

Disorders for PIR48714 Gene

No disorders were found for PIR48714 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48714 Gene

Publications for PIR48714 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48714 Gene

Sources for PIR48714 Gene

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