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Aliases for PIR48626 Gene

Subcategory (RNA class) for PIR48626 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48626 Gene

No Aliases found

ORGUL Members for PIR48626 Gene

Previous GeneCards Identifiers for PIR48626 Gene

  • GC03P120321

No data available for External Ids for PIR48626 Gene

Summaries for PIR48626 Gene

GeneCards Summary for PIR48626 Gene

PIR48626 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48626 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48626 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48626 Gene

Genomics for PIR48626 Gene

GeneHancer (GH) Regulatory Elements for PIR48626 Gene

Promoters and enhancers for PIR48626 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J120595 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.4 -5.6 -5635 2.6 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF48 YY1 POLR2B ZNF143 SP5 NDUFB4 FSTL1 GTF2E1 RABL3 PIR48626
GH03J120641 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +40.4 40356 1.4 HDAC1 ATF1 TAF9B NFRKB ZNF766 EGR1 ATF7 CREM NCOA1 ZNF592 HGD GTF2E1 RABL3 PIR48626
GH03J120677 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE 0.2 +78.3 78343 5.8 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF48 ETS1 YY1 SLC30A9 ATF7 HGD ENSG00000242622 RABL3 PIR48626
GH03J120622 Enhancer 1.1 ENCODE dbSUPER 0.3 +21.2 21155 2 PKNOX1 ATF1 INSM2 ZBTB40 RAD21 ZFP91 FOS ATF7 SMARCC1 REST LOC100130701 PIR48626 HGD
GH03J120644 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +42.8 42847 1 BRD4 ATF4 POLR2A EGR1 SOX6 IKZF1 ZEB2 EGR2 HGD PIR48626
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48626 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48626 Gene

Genomic Locations for PIR48626 Gene
chr3:120,602,273-120,602,301
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr3:120,321,120-120,321,148
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR48626 Gene

Genes around PIR48626 on UCSC Golden Path with GeneCards custom track

PIR48626 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48626 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48626 Gene

Function for PIR48626 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48626 Gene

Localization for PIR48626 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48626 Gene

Pathways & Interactions for PIR48626 Gene

SuperPathways for PIR48626 Gene

No Data Available

Interacting Proteins for PIR48626 Gene

Gene Ontology (GO) - Biological Process for PIR48626 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48626 Gene

Drugs & Compounds for PIR48626 Gene

No Compound Related Data Available

Transcripts for PIR48626 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48626 Gene

No ASD Table

Relevant External Links for PIR48626 Gene

GeneLoc Exon Structure for
PIR48626

No data available for mRNA/cDNA for PIR48626 Gene

Expression for PIR48626 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48626 Gene

Orthologs for PIR48626 Gene

No data available for Orthologs and Evolution for PIR48626 Gene

Paralogs for PIR48626 Gene

No data available for Paralogs for PIR48626 Gene

Variants for PIR48626 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48626 Gene

Disorders for PIR48626 Gene

No disorders were found for PIR48626 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48626 Gene

Publications for PIR48626 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48626 Gene

Sources for PIR48626 Gene

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