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Aliases for PIR48620 Gene

Subcategory (RNA class) for PIR48620 Gene


Quality Score for this RNA gene is


Aliases for PIR48620 Gene

No Aliases found

ORGUL Members for PIR48620 Gene

No data available for External Ids for PIR48620 Gene

Summaries for PIR48620 Gene

GeneCards Summary for PIR48620 Gene

PIR48620 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48620 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR48620

Additional gene information for PIR48620 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48620 Gene

Genomics for PIR48620 Gene

GeneHancer (GH) Regulatory Elements for PIR48620 Gene

Promoters and enhancers for PIR48620 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I000112 Enhancer 0.9 FANTOM5 Ensembl 550.8 -0.8 -816 2.8 NFIB BMI1 ZIC2 ZNF335 ZSCAN29 PRDM10 EZH2 NCOA6 L3MBTL2 RNF2 GC09P000117 GC09P000118 LINC01388 PIR48620 PIR58570 PIR36916 CBWD1 WASHC1 FOXD4 GC09M000091
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48620 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48620 Gene

Genomic Locations for PIR48620 Gene
31 bases
Plus strand

Genomic View for PIR48620 Gene

Genes around PIR48620 on UCSC Golden Path with GeneCards custom track

PIR48620 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48620 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48620 Gene

ORGUL Member Location for PIR48620 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48620 Gene

Proteins for PIR48620 Gene

Post-translational modifications for PIR48620 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR48620 Gene

Domains & Families for PIR48620 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR48620 Gene

Function for PIR48620 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48620 Gene

Localization for PIR48620 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48620 Gene

Pathways & Interactions for PIR48620 Gene

SuperPathways for PIR48620 Gene

No Data Available

Interacting Proteins for PIR48620 Gene

Gene Ontology (GO) - Biological Process for PIR48620 Gene


No data available for Pathways by source and SIGNOR curated interactions for PIR48620 Gene

Drugs & Compounds for PIR48620 Gene

No Compound Related Data Available

Transcripts for PIR48620 Gene

fRNAdb Secondary structures for PIR48620 Gene

  • FR226624

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48620 Gene

No ASD Table

Relevant External Links for PIR48620 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for PIR48620 Gene

Expression for PIR48620 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48620 Gene

Orthologs for PIR48620 Gene

No data available for Orthologs and Evolution for PIR48620 Gene

Paralogs for PIR48620 Gene

No data available for Paralogs for PIR48620 Gene

Variants for PIR48620 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48620 Gene

Disorders for PIR48620 Gene

No disorders were found for PIR48620 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48620 Gene

Publications for PIR48620 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48620 Gene

Sources for PIR48620 Gene

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