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Aliases for PIR48589 Gene

Subcategory (RNA class) for PIR48589 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48589 Gene

No Aliases found

ORGUL Members for PIR48589 Gene

Previous GeneCards Identifiers for PIR48589 Gene

  • GC22P042225
  • GC22P042242
  • GC22P042259
  • GC22P042271
  • GC22P042285
  • GC22P041838
  • GC22P041854
  • GC22P041870
  • GC22P041888
  • GC22P041898
  • GC22P041909
  • GC22P041919
  • GC22P041954

No data available for External Ids for PIR48589 Gene

Summaries for PIR48589 Gene

GeneCards Summary for PIR48589 Gene

PIR48589 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48589 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48589 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48589 Gene

Genomics for PIR48589 Gene

GeneHancer (GH) Regulatory Elements for PIR48589 Gene

Promoters and enhancers for PIR48589 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J041830 Enhancer 0.9 Ensembl ENCODE dbSUPER 650.7 +1.6 1577 0.3 ZBTB33 ZNF398 PRDM1 ZBTB12 GC22M042904 GC22P041847 GC22P041983 GC22P041984 GC22P041985 PIR39485 PIR56266 PIR56722 PIR48589 PIR58030
GH22J041824 Enhancer 0.8 ENCODE dbSUPER 650.7 -1.8 -1756 4.4 TFAP4 ZIC2 ZFHX2 EGR1 IKZF1 ZBTB33 PRDM1 EGR2 GC22P041982 GC22P041984 GC22P041985 PIR39485 PIR56458 PIR48589 PIR33152 PIR57820 PIR50046 PIR34550
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48589 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48589 Gene

Genomic Locations for PIR48589 Gene
chr22:41,828,872-41,828,901
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr22:42,224,876-42,224,905
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR48589 Gene

Genes around PIR48589 on UCSC Golden Path with GeneCards custom track

PIR48589 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48589 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48589 Gene

Function for PIR48589 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48589 Gene

Localization for PIR48589 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48589 Gene

Pathways & Interactions for PIR48589 Gene

SuperPathways for PIR48589 Gene

No Data Available

Interacting Proteins for PIR48589 Gene

Gene Ontology (GO) - Biological Process for PIR48589 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48589 Gene

Drugs & Compounds for PIR48589 Gene

No Compound Related Data Available

Transcripts for PIR48589 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48589 Gene

No ASD Table

Relevant External Links for PIR48589 Gene

GeneLoc Exon Structure for
PIR48589

No data available for mRNA/cDNA for PIR48589 Gene

Expression for PIR48589 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48589 Gene

Orthologs for PIR48589 Gene

No data available for Orthologs and Evolution for PIR48589 Gene

Paralogs for PIR48589 Gene

No data available for Paralogs for PIR48589 Gene

Variants for PIR48589 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48589 Gene

Disorders for PIR48589 Gene

No disorders were found for PIR48589 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48589 Gene

Publications for PIR48589 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48589 Gene

Sources for PIR48589 Gene

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