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Aliases for PIR48586 Gene

Subcategory (RNA class) for PIR48586 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48586 Gene

No Aliases found

ORGUL Members for PIR48586 Gene

Previous GeneCards Identifiers for PIR48586 Gene

  • GC0XP041201

No data available for External Ids for PIR48586 Gene

Summaries for PIR48586 Gene

GeneCards Summary for PIR48586 Gene

PIR48586 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48586 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48586 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48586 Gene

Genomics for PIR48586 Gene

GeneHancer (GH) Regulatory Elements for PIR48586 Gene

Promoters and enhancers for PIR48586 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ041329 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.9 -8851 7.8 CLOCK FEZF1 DMAP1 YBX1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 DDX3X CASK-AS1 CXorf38 USP9X MED14 NYX PIR48586
GH0XJ041337 Enhancer 0.5 dbSUPER 0.7 -4.5 -4469 1 GATA3 PRDM6 POLR2A STAT3 CEBPB EP300 DDX3X NYX PIR48586
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48586 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48586 Gene

Genomic Locations for PIR48586 Gene
chrX:41,342,557-41,342,584
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chrX:41,201,810-41,201,837
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR48586 Gene

Genes around PIR48586 on UCSC Golden Path with GeneCards custom track

PIR48586 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48586 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48586 Gene

Function for PIR48586 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48586 Gene

Localization for PIR48586 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48586 Gene

Pathways & Interactions for PIR48586 Gene

SuperPathways for PIR48586 Gene

No Data Available

Interacting Proteins for PIR48586 Gene

Gene Ontology (GO) - Biological Process for PIR48586 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48586 Gene

Drugs & Compounds for PIR48586 Gene

No Compound Related Data Available

Transcripts for PIR48586 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48586 Gene

No ASD Table

Relevant External Links for PIR48586 Gene

GeneLoc Exon Structure for
PIR48586

No data available for mRNA/cDNA for PIR48586 Gene

Expression for PIR48586 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48586 Gene

Orthologs for PIR48586 Gene

No data available for Orthologs and Evolution for PIR48586 Gene

Paralogs for PIR48586 Gene

No data available for Paralogs for PIR48586 Gene

Variants for PIR48586 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48586 Gene

Disorders for PIR48586 Gene

No disorders were found for PIR48586 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48586 Gene

Publications for PIR48586 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48586 Gene

Sources for PIR48586 Gene

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