Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR48522 Gene

Subcategory (RNA class) for PIR48522 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48522 Gene

No Aliases found

ORGUL Members for PIR48522 Gene

Previous GeneCards Identifiers for PIR48522 Gene

  • GC14P068052

No data available for External Ids for PIR48522 Gene

Summaries for PIR48522 Gene

GeneCards Summary for PIR48522 Gene

PIR48522 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48522 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48522 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48522 Gene

Genomics for PIR48522 Gene

GeneHancer (GH) Regulatory Elements for PIR48522 Gene

Promoters and enhancers for PIR48522 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J067585 Enhancer 0.9 ENCODE dbSUPER 650.7 -1.4 -1364 0.2 CTCF RB1 RAD21 RFX5 TEAD3 GATA3 GATAD1 ARID2 ZNF143 SMC3 PIR48522 ENSG00000201529 ARG2 PLEKHH1 RDH12 RN7SL369P PIGH TMEM229B
GH14J067584 Enhancer 0.4 dbSUPER 650.7 +0.6 595 2.8 ZNF548 RUNX3 PIR48522 ZFYVE26 ARG2 ENSG00000201529 PLEKHH1 RDH12 RN7SL369P PIGH
GH14J067599 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 +14.6 14597 2.1 PKNOX1 ARID4B SIN3A DMAP1 YY1 ZNF207 ZNF143 SP3 MXD4 REST PIGH LOC105370543 ZFYVE26 HMGB1P34 ENSG00000259502 PIR48522
GH14J067587 Enhancer 0.6 ENCODE 0.7 +3.3 3263 1.9 FOXA2 TAL1 MAFG CBFA2T3 SKI TCF12 SP1 ZNF316 HNF4A MAFK ENSG00000201529 ARG2 PLEKHH1 RDH12 RN7SL369P PIGH HMGB1P34 PIR48522
GH14J067540 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -43.8 -43765 3 HDAC1 PKNOX1 ARNT NFRKB ZBTB40 POLR2B ZNF766 GATA2 REST ELF1 TMEM229B PLEKHH1 PIR48522
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48522 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48522 Gene

Genomic Locations for PIR48522 Gene
chr14:67,585,603-67,585,629
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr14:68,052,320-68,052,346
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR48522 Gene

Genes around PIR48522 on UCSC Golden Path with GeneCards custom track

PIR48522 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48522 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48522 Gene

Function for PIR48522 Gene

Phenotypes From GWAS Catalog for PIR48522 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48522 Gene

Localization for PIR48522 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48522 Gene

Pathways & Interactions for PIR48522 Gene

SuperPathways for PIR48522 Gene

No Data Available

Interacting Proteins for PIR48522 Gene

Gene Ontology (GO) - Biological Process for PIR48522 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48522 Gene

Drugs & Compounds for PIR48522 Gene

No Compound Related Data Available

Transcripts for PIR48522 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48522 Gene

No ASD Table

Relevant External Links for PIR48522 Gene

GeneLoc Exon Structure for
PIR48522

No data available for mRNA/cDNA for PIR48522 Gene

Expression for PIR48522 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48522 Gene

Orthologs for PIR48522 Gene

No data available for Orthologs and Evolution for PIR48522 Gene

Paralogs for PIR48522 Gene

No data available for Paralogs for PIR48522 Gene

Variants for PIR48522 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48522 Gene

Disorders for PIR48522 Gene

No disorders were found for PIR48522 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48522 Gene

Publications for PIR48522 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48522 Gene

Sources for PIR48522 Gene

Content
Loading form....