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Aliases for PIR48513 Gene

Subcategory (RNA class) for PIR48513 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR48513 Gene

No Aliases found

ORGUL Members for PIR48513 Gene

Previous GeneCards Identifiers for PIR48513 Gene

  • GC01P180147

No data available for External Ids for PIR48513 Gene

Summaries for PIR48513 Gene

GeneCards Summary for PIR48513 Gene

PIR48513 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48513 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR48513

Additional gene information for PIR48513 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48513 Gene

Genomics for PIR48513 Gene

GeneHancer (GH) Regulatory Elements for PIR48513 Gene

Promoters and enhancers for PIR48513 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J180178 Enhancer 0.9 ENCODE dbSUPER 650.7 +0.2 223 0.1 CTCF RB1 FEZF1 RAD21 CC2D1A GATA3 POLR2A ARID2 ZNF143 SMC3 GC01P180178 GC01M180933 PIR48513 QSOX1 TOR1AIP1 TOR1AIP2 FLJ23867
GH01J180177 Enhancer 0.4 dbSUPER 650.7 -0.9 -916 1 GLIS1 WT1 GC01P180178 GC01M180933 PIR48513 QSOX1 TOR1AIP1 TOR1AIP2 PIR57354
GH01J180180 Enhancer 0.6 dbSUPER 0.7 +3.9 3935 4.1 CTCF PKNOX1 ATF1 MAFG DPF2 ZIC2 MAFF ZNF316 EMSY CREM QSOX1 LHX4 TOR1AIP1 TOR1AIP2 GC01P180178 PIR48513 FLJ23867
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48513 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48513 Gene

Genomic Locations for PIR48513 Gene
chr1:180,178,808-180,178,838
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr1:180,147,943-180,147,973
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR48513 Gene

Genes around PIR48513 on UCSC Golden Path with GeneCards custom track

PIR48513 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48513 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48513 Gene

ORGUL Member Location for PIR48513 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48513 Gene

Function for PIR48513 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48513 Gene

Localization for PIR48513 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48513 Gene

Pathways & Interactions for PIR48513 Gene

SuperPathways for PIR48513 Gene

No Data Available

Interacting Proteins for PIR48513 Gene

Gene Ontology (GO) - Biological Process for PIR48513 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48513 Gene

Drugs & Compounds for PIR48513 Gene

No Compound Related Data Available

Transcripts for PIR48513 Gene

fRNAdb Secondary structures for PIR48513 Gene

  • FR284128

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48513 Gene

No ASD Table

Relevant External Links for PIR48513 Gene

GeneLoc Exon Structure for
PIR48513

No data available for mRNA/cDNA for PIR48513 Gene

Expression for PIR48513 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48513 Gene

Orthologs for PIR48513 Gene

No data available for Orthologs and Evolution for PIR48513 Gene

Paralogs for PIR48513 Gene

No data available for Paralogs for PIR48513 Gene

Variants for PIR48513 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48513 Gene

Disorders for PIR48513 Gene

No disorders were found for PIR48513 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48513 Gene

Publications for PIR48513 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48513 Gene

Sources for PIR48513 Gene

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