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Aliases for PIR48512 Gene

Subcategory (RNA class) for PIR48512 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48512 Gene

No Aliases found

ORGUL Members for PIR48512 Gene

Previous GeneCards Identifiers for PIR48512 Gene

  • GC15M041313

No data available for External Ids for PIR48512 Gene

Summaries for PIR48512 Gene

GeneCards Summary for PIR48512 Gene

PIR48512 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48512 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48512 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48512 Gene

Genomics for PIR48512 Gene

GeneHancer (GH) Regulatory Elements for PIR48512 Gene

Promoters and enhancers for PIR48512 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J041022 Enhancer 0.6 ENCODE 650.7 -1.6 -1569 0.2 CTCF ZNF654 TRIM22 RAD21 ZNF143 SMC3 DEK CHD2 PIR48512 ENSG00000251161 VPS18 DLL4 CHAC1 SPINT1 INO80-AS1 GC15M041033 INO80
GH15J041020 Enhancer 0.6 ENCODE 650.7 +0.2 200 0.4 SOX13 TFAP4 FOXA2 NFIA SAP130 ARID4B CEBPG TEAD3 SKI NFIL3 PIR48512 ENSG00000251161 VPS18 DLL4 NDUFAF1 CHAC1 SPINT1 RTF1 ENSG00000280036 INO80-AS1
GH15J041023 Enhancer 0.5 Ensembl ENCODE 0.7 -3.6 -3596 2.1 GLIS1 ENSG00000251161 VPS18 DLL4 CHAC1 NDUFAF1 SPINT1 RNU6-1169P INO80 PIR48512 INO80-AS1
GH15J041036 Enhancer 0.5 ENCODE 0.4 -15.2 -15169 0.2 OSR2 PRDM6 ZBTB6 HLF ZNF843 ZXDB PIR48512 GC15M041033 INO80
GH15J041079 Enhancer 0.3 ENCODE 0.2 -58.9 -58901 1.1 RUNX3 ENSG00000251161 VPS18 DLL4 SPINT1 CHAC1 INO80 GC15M041033 PIR48512
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48512 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48512 Gene

Genomic Locations for PIR48512 Gene
chr15:41,021,080-41,021,109
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr15:41,313,278-41,313,307
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR48512 Gene

Genes around PIR48512 on UCSC Golden Path with GeneCards custom track

PIR48512 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48512 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48512 Gene

Function for PIR48512 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48512 Gene

Localization for PIR48512 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48512 Gene

Pathways & Interactions for PIR48512 Gene

SuperPathways for PIR48512 Gene

No Data Available

Interacting Proteins for PIR48512 Gene

Gene Ontology (GO) - Biological Process for PIR48512 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48512 Gene

Drugs & Compounds for PIR48512 Gene

No Compound Related Data Available

Transcripts for PIR48512 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48512 Gene

No ASD Table

Relevant External Links for PIR48512 Gene

GeneLoc Exon Structure for
PIR48512

No data available for mRNA/cDNA for PIR48512 Gene

Expression for PIR48512 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48512 Gene

Orthologs for PIR48512 Gene

No data available for Orthologs and Evolution for PIR48512 Gene

Paralogs for PIR48512 Gene

No data available for Paralogs for PIR48512 Gene

Variants for PIR48512 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48512 Gene

Disorders for PIR48512 Gene

No disorders were found for PIR48512 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48512 Gene

Publications for PIR48512 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48512 Gene

Sources for PIR48512 Gene

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