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Aliases for PIR48502 Gene

Subcategory (RNA class) for PIR48502 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48502 Gene

No Aliases found

ORGUL Members for PIR48502 Gene

Previous GeneCards Identifiers for PIR48502 Gene

  • GC17P081056

No data available for External Ids for PIR48502 Gene

Summaries for PIR48502 Gene

GeneCards Summary for PIR48502 Gene

PIR48502 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48502 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48502 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48502 Gene

Genomics for PIR48502 Gene

GeneHancer (GH) Regulatory Elements for PIR48502 Gene

Promoters and enhancers for PIR48502 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J083096 Enhancer 0.9 ENCODE dbSUPER 650.7 -0.7 -708 0.8 HDGF CTCF PKNOX1 CLOCK NFIB SIN3A PAX8 ZEB1 ZNF507 E2F1 ENSG00000274370 PIR48502 CSNK1D OGFOD3 METRNL
GH17J083078 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.2 -13225 11.2 HDGF PKNOX1 NEUROD1 SIN3A ZBTB7B BRCA1 ZNF766 GLIS2 ELK1 FOS METRNL ENSG00000260563 OGFOD3 HEXDC NARF-IT1 ENSG00000262652 ENSG00000265678 CSNK1D ARL2BPP9 B3GNTL1
GH17J083097 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.4 2364 4.7 CTCF TFAP4 NFIB SIN3A ZIC2 ZBTB7B RBPJ HIC1 ZNF335 ZFHX2 ENSG00000274370 ENSG00000261888 B3GNTL1 METRNL PIR48502
GH17J083090 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.3 -6261 2 ESRRA MAX REST PPARG ZNF217 ZFHX2 BCL6 FOS ZBTB33 ZFX ENSG00000261888 ENSG00000262663 PIR48502 METRNL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48502 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48502 Gene

Genomic Locations for PIR48502 Gene
chr17:83,097,798-83,097,824
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr17:81,055,543-81,055,569
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR48502 Gene

Genes around PIR48502 on UCSC Golden Path with GeneCards custom track

PIR48502 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48502 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48502 Gene

Function for PIR48502 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48502 Gene

Localization for PIR48502 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48502 Gene

Pathways & Interactions for PIR48502 Gene

SuperPathways for PIR48502 Gene

No Data Available

Interacting Proteins for PIR48502 Gene

Gene Ontology (GO) - Biological Process for PIR48502 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48502 Gene

Drugs & Compounds for PIR48502 Gene

No Compound Related Data Available

Transcripts for PIR48502 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48502 Gene

No ASD Table

Relevant External Links for PIR48502 Gene

GeneLoc Exon Structure for
PIR48502

No data available for mRNA/cDNA for PIR48502 Gene

Expression for PIR48502 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48502 Gene

Orthologs for PIR48502 Gene

No data available for Orthologs and Evolution for PIR48502 Gene

Paralogs for PIR48502 Gene

No data available for Paralogs for PIR48502 Gene

Variants for PIR48502 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48502 Gene

Disorders for PIR48502 Gene

No disorders were found for PIR48502 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48502 Gene

Publications for PIR48502 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48502 Gene

Sources for PIR48502 Gene

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