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Aliases for PIR48490 Gene

Subcategory (RNA class) for PIR48490 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR48490 Gene

No Aliases found

ORGUL Members for PIR48490 Gene

Previous GeneCards Identifiers for PIR48490 Gene

  • GC06P033929
  • GC06P034407
  • GC06P035718
  • GC06P036267
  • GC06P037253
  • GC06P034871
  • GC06P035452
  • GC06P037204
  • GC06P038267
  • GC06P038908
  • GC06P039495
  • GC06P040056
  • GC06P041113

No data available for External Ids for PIR48490 Gene

Summaries for PIR48490 Gene

GeneCards Summary for PIR48490 Gene

PIR48490 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48490 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR48490

Additional gene information for PIR48490 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48490 Gene

Genomics for PIR48490 Gene

GeneHancer (GH) Regulatory Elements for PIR48490 Gene

Promoters and enhancers for PIR48490 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033908 Enhancer 0.7 ENCODE 650.7 +0.4 360 0.2 FOXA2 TAF1 MAX RAD21 RARA YY1 EGR1 HNF4G MIXL1 RXRA GC06M038838 GC06P042279 GC06P042430 GC06P042431 GC06P042435 GC06P042439 GC06P042443 GC06P042452 GC06P042470 GC06P042474
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48490 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48490 Gene

Genomic Locations for PIR48490 Gene
chr6:33,907,759-33,907,791
(GRCh38/hg38)
Size:
33 bases
Orientation:
Plus strand
chr6:33,875,536-33,875,568
(GRCh37/hg19)
Size:
33 bases
Orientation:
Plus strand

Genomic View for PIR48490 Gene

Genes around PIR48490 on UCSC Golden Path with GeneCards custom track

PIR48490 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48490 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48490 Gene

ORGUL Member Location for PIR48490 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48490 Gene

Function for PIR48490 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48490 Gene

Localization for PIR48490 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48490 Gene

Pathways & Interactions for PIR48490 Gene

SuperPathways for PIR48490 Gene

No Data Available

Interacting Proteins for PIR48490 Gene

Gene Ontology (GO) - Biological Process for PIR48490 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48490 Gene

Drugs & Compounds for PIR48490 Gene

No Compound Related Data Available

Transcripts for PIR48490 Gene

fRNAdb Secondary structures for PIR48490 Gene

  • FR042854

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48490 Gene

No ASD Table

Relevant External Links for PIR48490 Gene

GeneLoc Exon Structure for
PIR48490

No data available for mRNA/cDNA for PIR48490 Gene

Expression for PIR48490 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48490 Gene

Orthologs for PIR48490 Gene

No data available for Orthologs and Evolution for PIR48490 Gene

Paralogs for PIR48490 Gene

No data available for Paralogs for PIR48490 Gene

Variants for PIR48490 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48490 Gene

Disorders for PIR48490 Gene

No disorders were found for PIR48490 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48490 Gene

Publications for PIR48490 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48490 Gene

Sources for PIR48490 Gene

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