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Aliases for PIR48485 Gene

Subcategory (RNA class) for PIR48485 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR48485 Gene

No Aliases found

ORGUL Members for PIR48485 Gene

Previous GeneCards Identifiers for PIR48485 Gene

  • GC09M082523
  • GC09M082654
  • GC09M082963
  • GC09M083115
  • GC09M083350
  • GC09M079908
  • GC09M080035
  • GC09M080157
  • GC09M080282
  • GC09M080411
  • GC09M080538
  • GC09M080679
  • GC09M080811

No data available for External Ids for PIR48485 Gene

Summaries for PIR48485 Gene

GeneCards Summary for PIR48485 Gene

PIR48485 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48485 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48485 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48485 Gene

Genomics for PIR48485 Gene

GeneHancer (GH) Regulatory Elements for PIR48485 Gene

Promoters and enhancers for PIR48485 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J079868 Enhancer 0.5 FANTOM5 ENCODE 650.7 -1.1 -1103 0.8 GC09M081026 GC09M081032 GC09M081040 GC09M081042 GC09M081044 GC09M081047 GC09M081049 GC09M081059 GC09M081067 GC09M081074
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48485 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48485 Gene

Genomic Locations for PIR48485 Gene
chr9:79,867,977-79,868,007
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr9:82,482,892-82,482,922
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR48485 Gene

Genes around PIR48485 on UCSC Golden Path with GeneCards custom track

PIR48485 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48485 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48485 Gene

ORGUL Member Location for PIR48485 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48485 Gene

Function for PIR48485 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48485 Gene

Localization for PIR48485 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48485 Gene

Pathways & Interactions for PIR48485 Gene

SuperPathways for PIR48485 Gene

No Data Available

Interacting Proteins for PIR48485 Gene

Gene Ontology (GO) - Biological Process for PIR48485 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48485 Gene

Drugs & Compounds for PIR48485 Gene

No Compound Related Data Available

Transcripts for PIR48485 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48485 Gene

No ASD Table

Relevant External Links for PIR48485 Gene

GeneLoc Exon Structure for
PIR48485

No data available for mRNA/cDNA for PIR48485 Gene

Expression for PIR48485 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48485 Gene

Orthologs for PIR48485 Gene

No data available for Orthologs and Evolution for PIR48485 Gene

Paralogs for PIR48485 Gene

No data available for Paralogs for PIR48485 Gene

Variants for PIR48485 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48485 Gene

Disorders for PIR48485 Gene

No disorders were found for PIR48485 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48485 Gene

Publications for PIR48485 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48485 Gene

Sources for PIR48485 Gene

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