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Aliases for PIR48481 Gene

Subcategory (RNA class) for PIR48481 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR48481 Gene

No Aliases found

ORGUL Members for PIR48481 Gene

Previous GeneCards Identifiers for PIR48481 Gene

  • GC10P099436

No data available for External Ids for PIR48481 Gene

Summaries for PIR48481 Gene

GeneCards Summary for PIR48481 Gene

PIR48481 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48481 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48481 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48481 Gene

Genomics for PIR48481 Gene

GeneHancer (GH) Regulatory Elements for PIR48481 Gene

Promoters and enhancers for PIR48481 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I097676 Enhancer 0.9 ENCODE dbSUPER 550.8 +1.4 1443 1 HDGF CTCF FOXA2 ZNF2 RAD21 ZEB1 CC2D1A POLR2B GATAD1 E2F8 PIR48246 PIR48481 MORN4 LCOR MMS19 R3HCC1L ANKRD2 AVPI1 GC10M097562 PI4K2A
GH10I097673 Enhancer 0.8 ENCODE dbSUPER 550.8 -1.1 -1064 1.5 MAX CEBPB NFIC CTBP1 POLR2A NR2C1 KLF9 PRDM4 NR2C2 PIR48481 PIR48246 MORN4 ZFYVE27 PI4K2A GC10M097562 ENSG00000249967
GH10I097639 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -34.2 -34217 2.7 HDGF PKNOX1 FOXA2 ARID4B SIN3A YY1 ZNF213 ZNF143 FOS SP3 PI4K2A R3HCC1L MORN4 ZFYVE27 HPS1 ANKRD2 AVPI1 C10orf62 HOGA1 ENSG00000249967
GH10I097661 Enhancer 1.1 ENCODE dbSUPER 0.4 -9.2 -9181 9.6 ATF1 FOXA2 ARNT ETS1 YY1 NCOA2 TCF12 ZNF121 ZNF766 ATF7 MORN4 AVPI1 ZFYVE27 HOGA1 PIR48481 PI4K2A GC10M097562 ENSG00000249967
GH10I097647 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -25.0 -25034 6 PKNOX1 ATF1 ZFP64 SIN3A NCOA2 TCF12 ZNF121 ZNF766 ATF7 FOS MORN4 MMS19 PI4K2A PIR48481 GC10M097562 ENSG00000249967
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48481 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48481 Gene

Genomic Locations for PIR48481 Gene
chr10:97,675,383-97,675,412
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr10:99,435,140-99,435,169
(GRCh37/hg19)

Genomic View for PIR48481 Gene

Genes around PIR48481 on UCSC Golden Path with GeneCards custom track

PIR48481 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48481 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48481 Gene

Proteins for PIR48481 Gene

Post-translational modifications for PIR48481 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR48481 Gene

Domains & Families for PIR48481 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR48481 Gene

Function for PIR48481 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48481 Gene

Localization for PIR48481 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48481 Gene

Pathways & Interactions for PIR48481 Gene

SuperPathways for PIR48481 Gene

No Data Available

Interacting Proteins for PIR48481 Gene

Gene Ontology (GO) - Biological Process for PIR48481 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48481 Gene

Drugs & Compounds for PIR48481 Gene

No Compound Related Data Available

Transcripts for PIR48481 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48481 Gene

No ASD Table

Relevant External Links for PIR48481 Gene

GeneLoc Exon Structure for
PIR48481

No data available for mRNA/cDNA for PIR48481 Gene

Expression for PIR48481 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48481 Gene

Orthologs for PIR48481 Gene

No data available for Orthologs and Evolution for PIR48481 Gene

Paralogs for PIR48481 Gene

No data available for Paralogs for PIR48481 Gene

Variants for PIR48481 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48481 Gene

Disorders for PIR48481 Gene

No disorders were found for PIR48481 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48481 Gene

Publications for PIR48481 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48481 Gene

Sources for PIR48481 Gene

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