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Aliases for PIR48464 Gene

Subcategory (RNA class) for PIR48464 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48464 Gene

No Aliases found

ORGUL Members for PIR48464 Gene

Previous GeneCards Identifiers for PIR48464 Gene

  • GC07M071872

No data available for External Ids for PIR48464 Gene

Summaries for PIR48464 Gene

GeneCards Summary for PIR48464 Gene

PIR48464 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48464 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48464 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48464 Gene

Genomics for PIR48464 Gene

GeneHancer (GH) Regulatory Elements for PIR48464 Gene

Promoters and enhancers for PIR48464 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J072405 Enhancer 1 FANTOM5 ENCODE 650.7 +1.5 1481 0.8 ZSCAN4 MAX BATF FOSL1 ZFHX2 EGR1 ATF7 FOS RUNX3 CREM PIR48464 CALN1 TYW1B PIR53501 GC07M072322
GH07J072403 Enhancer 0.6 ENCODE 0.7 +3.6 3610 0.9 ATF4 EED IKZF1 CEBPB TRIM24 CEBPG ZNF24 RUNX3 CALN1 PIR48464 PIR53501 GC07M072322
GH07J072412 Promoter 0.9 EPDnew 0.4 -5.2 -5191 0.1 SMAD5 TAF9B NFATC3 ASH1L MAFG CC2D1A POLR2B ZNF316 MTA3 POLR2A CALN1 PIR48464
GH07J072335 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE dbSUPER 0.2 +70.4 70383 2.6 MXI1 POLR2A MAX CTBP2 EZH2 CALN1 GTF2IP4 PIR53501 GC07M072322 PIR48464
GH07J072336 Enhancer 0.6 ENCODE dbSUPER 0.2 +72.9 72876 0.2 CTCF RAD21 GC07M072322 PIR53501 PIR48464 CALN1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48464 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48464 Gene

Genomic Locations for PIR48464 Gene
chr7:72,407,141-72,407,167
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr7:71,872,126-71,872,152
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR48464 Gene

Genes around PIR48464 on UCSC Golden Path with GeneCards custom track

PIR48464 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48464 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48464 Gene

Function for PIR48464 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48464 Gene

Localization for PIR48464 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48464 Gene

Pathways & Interactions for PIR48464 Gene

SuperPathways for PIR48464 Gene

No Data Available

Interacting Proteins for PIR48464 Gene

Gene Ontology (GO) - Biological Process for PIR48464 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48464 Gene

Drugs & Compounds for PIR48464 Gene

No Compound Related Data Available

Transcripts for PIR48464 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48464 Gene

No ASD Table

Relevant External Links for PIR48464 Gene

GeneLoc Exon Structure for
PIR48464

No data available for mRNA/cDNA for PIR48464 Gene

Expression for PIR48464 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48464 Gene

Orthologs for PIR48464 Gene

No data available for Orthologs and Evolution for PIR48464 Gene

Paralogs for PIR48464 Gene

No data available for Paralogs for PIR48464 Gene

Variants for PIR48464 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48464 Gene

Disorders for PIR48464 Gene

No disorders were found for PIR48464 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48464 Gene

Publications for PIR48464 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48464 Gene

Sources for PIR48464 Gene

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