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Aliases for PIR48451 Gene

Subcategory (RNA class) for PIR48451 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48451 Gene

No Aliases found

ORGUL Members for PIR48451 Gene

No data available for External Ids for PIR48451 Gene

Summaries for PIR48451 Gene

GeneCards Summary for PIR48451 Gene

PIR48451 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48451 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48451 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48451 Gene

Genomics for PIR48451 Gene

GeneHancer (GH) Regulatory Elements for PIR48451 Gene

Promoters and enhancers for PIR48451 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J001795 Enhancer 1.2 Ensembl ENCODE 0.7 +2.5 2543 1.3 HDGF ATF1 ARNT ARID4B ZNF2 ZNF121 GLIS2 E2F8 ARID2 ZNF143 SF3A2 DAZAP1 PTBP1 TCF3 ENSG00000267317 LOC100288123 TMEM259 CNN2 ATP8B3 PIR48451
GH19J001810 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 -13.4 -13395 3 HDGF PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF207 ATP8B3 MUM1 CIRBP SF3A2 MEX3D GC19M001802 PIR48451
GH19J001788 Enhancer 1 Ensembl ENCODE 0.4 +8.8 8842 2.5 CTCF KLF1 PKNOX1 USF1 RB1 ZNF223 ASH1L CEBPG ZNF384 RAD21 DAZAP1 LOC100288123 TMEM259 PTBP1 SF3A2 TCF3 ONECUT3 MED16 ENSG00000267317 DOT1L
GH19J001794 Enhancer 0.5 ENCODE 0.7 +4.2 4177 0.1 MEIS2 GLIS2 BACH1 MNT PRDM10 ZIC2 ETS1 REXO1 RNU6-1223P TCF3 PIR48451 GC19P001786 ATP8B3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR48451 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48451 Gene

Genomic Locations for PIR48451 Gene
chr19:1,798,797-1,798,824
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr19:1,798,796-1,798,823
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR48451 Gene

Genes around PIR48451 on UCSC Golden Path with GeneCards custom track

PIR48451 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48451 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48451 Gene

Function for PIR48451 Gene

Phenotypes From GWAS Catalog for PIR48451 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48451 Gene

Localization for PIR48451 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48451 Gene

Pathways & Interactions for PIR48451 Gene

SuperPathways for PIR48451 Gene

No Data Available

Interacting Proteins for PIR48451 Gene

Gene Ontology (GO) - Biological Process for PIR48451 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48451 Gene

Drugs & Compounds for PIR48451 Gene

No Compound Related Data Available

Transcripts for PIR48451 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48451 Gene

No ASD Table

Relevant External Links for PIR48451 Gene

GeneLoc Exon Structure for
PIR48451

No data available for mRNA/cDNA for PIR48451 Gene

Expression for PIR48451 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48451 Gene

Orthologs for PIR48451 Gene

No data available for Orthologs and Evolution for PIR48451 Gene

Paralogs for PIR48451 Gene

No data available for Paralogs for PIR48451 Gene

Variants for PIR48451 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48451 Gene

Disorders for PIR48451 Gene

No disorders were found for PIR48451 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48451 Gene

Publications for PIR48451 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48451 Gene

Sources for PIR48451 Gene

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