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Aliases for PIR48186 Gene

Subcategory (RNA class) for PIR48186 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48186 Gene

No Aliases found

ORGUL Members for PIR48186 Gene

Previous GeneCards Identifiers for PIR48186 Gene

  • GC07P001582

No data available for External Ids for PIR48186 Gene

Summaries for PIR48186 Gene

GeneCards Summary for PIR48186 Gene

PIR48186 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48186 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48186 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48186 Gene

Genomics for PIR48186 Gene

GeneHancer (GH) Regulatory Elements for PIR48186 Gene

Promoters and enhancers for PIR48186 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J001542 Enhancer 0.5 dbSUPER 650.7 +1.7 1699 1.4 PAF1 JUND POLR2A USF2 ZBTB33 PIR48186 INTS1 PSMG3-AS1 MAFK TMEM184A
GH07J001541 Enhancer 0.5 ENCODE dbSUPER 650.7 -1.2 -1174 0.1 ZBTB33 PIR48186 PIR32494 GC07P001540 LOC100128653 MAFK
GH07J001540 Enhancer 0.4 dbSUPER 650.7 +0.1 125 1.5 ZFHX2 POLR2A RBM22 PIR48186 PIR32494 GC07P001540 INTS1 MICALL2 MAFK TMEM184A
GH07J001553 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 0.4 +16.2 16223 7.5 FOXA2 PKNOX1 CLOCK MLX ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF143 TMEM184A BRAT1 CHST12 INTS1 PSMG3-AS1 MICALL2 PIR48186
GH07J001543 Enhancer 0.6 dbSUPER 0.7 +4.5 4513 4 CTCF SIN3A EBF1 ZIC2 RAD21 ZNF692 POLR2A GLIS1 ZBTB33 INTS1 TMEM184A PIR48186
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR48186 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48186 Gene

Genomic Locations for PIR48186 Gene
chr7:1,541,300-1,541,327
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr7:1,580,936-1,580,963
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR48186 Gene

Genes around PIR48186 on UCSC Golden Path with GeneCards custom track

PIR48186 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48186 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48186 Gene

Function for PIR48186 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48186 Gene

Localization for PIR48186 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48186 Gene

Pathways & Interactions for PIR48186 Gene

SuperPathways for PIR48186 Gene

No Data Available

Interacting Proteins for PIR48186 Gene

Gene Ontology (GO) - Biological Process for PIR48186 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48186 Gene

Drugs & Compounds for PIR48186 Gene

No Compound Related Data Available

Transcripts for PIR48186 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48186 Gene

No ASD Table

Relevant External Links for PIR48186 Gene

GeneLoc Exon Structure for
PIR48186

No data available for mRNA/cDNA for PIR48186 Gene

Expression for PIR48186 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48186 Gene

Orthologs for PIR48186 Gene

No data available for Orthologs and Evolution for PIR48186 Gene

Paralogs for PIR48186 Gene

No data available for Paralogs for PIR48186 Gene

Variants for PIR48186 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48186 Gene

Disorders for PIR48186 Gene

No disorders were found for PIR48186 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48186 Gene

Publications for PIR48186 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48186 Gene

Sources for PIR48186 Gene

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