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Aliases for PIR48168 Gene

Subcategory (RNA class) for PIR48168 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR48168 Gene

No Aliases found

ORGUL Members for PIR48168 Gene

Previous GeneCards Identifiers for PIR48168 Gene

  • GC15P089695

No data available for External Ids for PIR48168 Gene

Summaries for PIR48168 Gene

GeneCards Summary for PIR48168 Gene

PIR48168 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48168 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR48168

Additional gene information for PIR48168 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48168 Gene

Genomics for PIR48168 Gene

GeneHancer (GH) Regulatory Elements for PIR48168 Gene

Promoters and enhancers for PIR48168 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J089149 Enhancer 1 Ensembl ENCODE dbSUPER 650.7 -1.2 -1185 2.5 SOX13 GATAD2A FOXA2 FOXA3 ZNF133 HMG20A NFIL3 GATA3 ZBTB33 MAFK GC15P089153 PIR48168 RNU7-195P ABHD2 RLBP1 POLG GC15P089142
GH15J089152 Enhancer 0.2 dbSUPER 650.7 +1.3 1289 1.1 GC15P089153 PIR48168 RNU7-195P GC15P089156 ABHD2
GH15J089142 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -8.5 -8486 2.6 ZNF146 JUN ZNF140 EBF1 BATF ZIC2 FOSL1 GATA3 POLR2A RCOR1 GC15P089142 POLG GC15P089153 PIR48168 ABHD2
GH15J089148 Enhancer 0.5 dbSUPER 0.7 -3.2 -3198 0.7 ZNF316 MAFG NFE2 EMSY MAFK POLG GC15P089153 PIR48168 GC15P089142 ABHD2
GH15J089144 Enhancer 0.5 ENCODE dbSUPER 0.4 -7.1 -7125 0.1 ZNF146 GC15P089142 GC15P089153 PIR48168 ABHD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR48168 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48168 Gene

Genomic Locations for PIR48168 Gene
chr15:89,151,796-89,151,826
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr15:89,695,027-89,695,057
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR48168 Gene

Genes around PIR48168 on UCSC Golden Path with GeneCards custom track

PIR48168 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48168 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48168 Gene

ORGUL Member Location for PIR48168 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48168 Gene

Function for PIR48168 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48168 Gene

Localization for PIR48168 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48168 Gene

Pathways & Interactions for PIR48168 Gene

SuperPathways for PIR48168 Gene

No Data Available

Interacting Proteins for PIR48168 Gene

Gene Ontology (GO) - Biological Process for PIR48168 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48168 Gene

Drugs & Compounds for PIR48168 Gene

No Compound Related Data Available

Transcripts for PIR48168 Gene

fRNAdb Secondary structures for PIR48168 Gene

  • FR110946

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48168 Gene

No ASD Table

Relevant External Links for PIR48168 Gene

GeneLoc Exon Structure for
PIR48168

No data available for mRNA/cDNA for PIR48168 Gene

Expression for PIR48168 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48168 Gene

Orthologs for PIR48168 Gene

No data available for Orthologs and Evolution for PIR48168 Gene

Paralogs for PIR48168 Gene

No data available for Paralogs for PIR48168 Gene

Variants for PIR48168 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48168 Gene

Disorders for PIR48168 Gene

No disorders were found for PIR48168 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48168 Gene

Publications for PIR48168 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48168 Gene

Sources for PIR48168 Gene

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